RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 A0A087WZY1 265 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 C5orf51A6NDU8 294 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 ZNF705GA8MUZ8 300 aaPredicted RBP14.05□□□□□ -0.16
RTN1-209ENST00000611068 M0R143 59 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 RAMP1O60894 148 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 ASAH2BP0C7U1 165 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 POLR2HP52434 150 aaKnown RBP14.05□□□□□ -0.16
RTN1-209ENST00000611068 JOSD1Q15040 202 aaPredicted RBP14.05□□□□□ -0.16
RTN1-209ENST00000611068 ARSJQ5FYB0 599 aaPredicted RBP14.05□□□□□ -0.16
RTN1-209ENST00000611068 DCAF10Q5QP82 559 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 RPL7L1Q6DKI1 246 aaKnown RBP14.05□□□□□ -0.16
RTN1-209ENST00000611068 CLEC2AQ6UVW9 174 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 SCRT1Q9BWW7 348 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 BOD1L1Q8NFC6 3051 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 SLC22A31A6NKX4 558 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 EFNA2O43921 213 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 CALCBP10092 127 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 HLA-DOBP13765 273 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 C1orf140Q5VVS0 124 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 RPS19BP1Q86WX3 136 aaKnown RBP14.05□□□□□ -0.16
RTN1-209ENST00000611068 PRSS33Q8NF86 280 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 SLC25A31Q9H0C2 315 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 GNG8Q9UK08 70 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 VSIG4Q9Y279 399 aa14.05□□□□□ -0.16
RTN1-209ENST00000611068 TGIF2-C20orf24A0A0A6YYL0 155 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 FBXO45P0C2W1 286 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 ZBTB25P24278 435 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 C4orf17Q53FE4 359 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 CDCP2Q5VXM1 449 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 DPY19L2P2Q6ZN68 376 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 NUP54Q7Z3B4 507 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 GRINAQ7Z429 371 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 TMPRSS12Q86WS5 348 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 NPEPL1Q8NDH3 523 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 OR14K1Q8NGZ2 314 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 ABHD5Q8WTS1 349 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 ZNF587Q96SQ5 575 aaPredicted RBP14.04□□□□□ -0.16
RTN1-209ENST00000611068 CDC6Q99741 560 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 CST11Q9H112 138 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 SYT4Q9H2B2 425 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 PUS1Q9Y606 427 aaKnown RBP eCLIP14.04□□□□□ -0.16
RTN1-209ENST00000611068 CHCHD2Q9Y6H1 151 aaPredicted RBP14.04□□□□□ -0.16
RTN1-209ENST00000611068 LOC101059948A0A1B0GTJ6 334 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 TRGC1P0CF51 173 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 HKR1P10072 659 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 SFTPDP35247 375 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 RPS4XP62701 263 aaKnown RBP14.04□□□□□ -0.16
RTN1-209ENST00000611068 ATP1A1-AS1Q5TC04 95 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 TMEM164Q5U3C3 297 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 ZNF227Q86WZ6 799 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 OR13C8Q8NGS7 320 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 ZNF417Q8TAU3 575 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 M1APQ8TC57 530 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 RNASE8Q8TDE3 154 aaKnown RBP14.04□□□□□ -0.16
RTN1-209ENST00000611068 C15orf40Q8WUR7 153 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 CCNL2Q96S94 520 aaPredicted RBP14.04□□□□□ -0.16
RTN1-209ENST00000611068 NKX3-1Q99801 234 aaPredicted RBP14.04□□□□□ -0.16
RTN1-209ENST00000611068 P4HTMQ9NXG6 502 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 GRHPRQ9UBQ7 328 aa14.04□□□□□ -0.16
RTN1-209ENST00000611068 A0A1W2PNR3 127 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 BGLAPP02818 100 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 MELTFP08582 738 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 SLC6A9P48067 706 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 EGR3Q06889 387 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 GUK1Q16774 197 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 STAC2Q6ZMT1 411 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 FRZBQ92765 325 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 TSPAN32Q96QS1 320 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 DIRC2Q96SL1 478 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 EIF5A2Q9GZV4 153 aaKnown RBP14.03□□□□□ -0.16
RTN1-209ENST00000611068 OR5AC2Q9NZP5 309 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 STARD10Q9Y365 291 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 POMT1Q9Y6A1 747 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 EXPH5Q8NEV8 1989 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 PCSK5Q92824 1860 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 FRYQ5TBA9 3013 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 TRAV36DV7A0A075B6V5 113 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 TVP23AA6NH52 213 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 CTAG2O75638 210 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 WNT11O96014 354 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 HTR2CP28335 458 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 SULT1A2P50226 295 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 ZNF41P51814 821 aaPredicted RBP14.03□□□□□ -0.16
RTN1-209ENST00000611068 ERVFRD-1P60508 538 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 EXT1Q16394 746 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 TAF9BQ9HBM6 251 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 PARP11Q9NR21 331 aa14.03□□□□□ -0.16
RTN1-209ENST00000611068 TRBV6-7A0A0A0MS04 114 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 A0A0G2JMM0 328 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 A0A1W2PPB8 328 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 A0A1W2PRS3 328 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 ANKUB1A6NFN9 424 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 KIR3DP1A8MWS1 328 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 H3BSH0 61 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 RRP8O43159 456 aaKnown RBP14.02□□□□□ -0.16
RTN1-209ENST00000611068 HLA-GP17693 338 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 SLC2A5P22732 501 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 PRSS3P35030 304 aa14.02□□□□□ -0.16
RTN1-209ENST00000611068 SERPINF1P36955 418 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms