RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 IRGMA1A4Y4 181 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 SLC1A7O00341 560 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 SIGLEC5O15389 551 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 RPSAP08865 295 aaKnown RBP11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L2P0CJ85 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L3P0CJ86 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L4P0CJ87 422 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L5P0CJ88 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L6P0CJ89 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L7P0CJ90 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 NDUFB7P17568 137 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 PEX2P28328 305 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 TGM4P49221 684 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 CCR9P51686 369 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 FUT6P51993 359 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 BPIFB3P59826 476 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 ELF3P78545 371 aaPredicted RBP11.09□□□□□ -0.63
SENP3-209ENST00000610454 MRPL28Q13084 256 aaKnown RBP11.09□□□□□ -0.63
SENP3-209ENST00000610454 PDCD1Q15116 288 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 LPCAT4Q643R3 524 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4L9Q6RFH8 374 aaPredicted RBP11.09□□□□□ -0.63
SENP3-209ENST00000610454 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 SYS1Q8N2H4 156 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DHRSXQ8N5I4 330 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 TMEM185AQ8NFB2 350 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 OR13C3Q8NGS6 347 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 ANGPTL6Q8NI99 470 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 HAVCR2Q8TDQ0 301 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 PELI1Q96FA3 418 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 BORCS8Q96FH0 119 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 GAFA1Q96PS6 74 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 CHST5Q9GZS9 411 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 COMMD4Q9H0A8 199 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 CNTD2Q9H8S5 307 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 FRRS1LQ9P0K9 344 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 DUX4Q9UBX2 424 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 HHLA2Q9UM44 414 aa11.09□□□□□ -0.63
SENP3-209ENST00000610454 A0A1W2PQ09 198 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ANKRD65E5RJM6 399 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 SYNGR1O43759 233 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 CYB5AP00167 134 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 PLATP00750 562 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 IGHA1P01876 353 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ISG15P05161 165 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 SFTPBP07988 381 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ACAA1P09110 424 aaPredicted RBP11.08□□□□□ -0.64
SENP3-209ENST00000610454 PGA5P0DJD9 388 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 PSG2P11465 335 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 GBX2P52951 348 aaPredicted RBP11.08□□□□□ -0.64
SENP3-209ENST00000610454 ARF6P62330 175 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 BAMBIQ13145 260 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 MED21Q13503 144 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ALKBH1Q13686 389 aaKnown RBP11.08□□□□□ -0.64
SENP3-209ENST00000610454 ZNF691Q5VV52 312 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ACP7Q6ZNF0 438 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 EGFL6Q8IUX8 553 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 RDH10Q8IZV5 341 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
SENP3-209ENST00000610454 FAM216AQ8WUB2 273 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 GATAD2BQ8WXI9 593 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ZDHHC16Q969W1 377 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 PKIBQ9C010 78 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ZMAT3Q9HA38 289 aaKnown RBP11.08□□□□□ -0.64
SENP3-209ENST00000610454 NEK6Q9HC98 313 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 ERVK13-1Q9NX77 482 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 MYRFQ9Y2G1 1151 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 KPTNQ9Y664 436 aa11.08□□□□□ -0.64
SENP3-209ENST00000610454 IGKV1D-17A0A075B6S4 117 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 RFPL4AA6NLU0 287 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 RFPL4AL1F8VTS6 287 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 NOS1APO75052 506 aaPredicted RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 TFF1P04155 84 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 CCDC159P0C7I6 412 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 SELLP14151 372 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 MYL12AP19105 171 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 PRKACBP22694 351 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 MPZP25189 248 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 RBP2P50120 134 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 ATP1B3P54709 279 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 CAV3P56539 151 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 NANOS3P60323 173 aaKnown RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 IL24Q13007 206 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 BLMHQ13867 455 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 UBE2V2Q15819 145 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 DGUOKQ16854 277 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 FIP1L1Q6UN15 594 aaKnown RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 BRD3OSQ6XYD6 125 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 TMPRSS11AQ6ZMR5 421 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 ANGPTL5Q86XS5 388 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 ZNF561Q8N587 486 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 KIR3DL3Q8N743 410 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 OR52I1Q8NGK6 324 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 APH1BQ8WW43 257 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 GCDHQ92947 438 aaPredicted RBP11.07□□□□□ -0.64
SENP3-209ENST00000610454 LHX4Q969G2 390 aa11.07□□□□□ -0.64
SENP3-209ENST00000610454 FGGYQ96C11 551 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms