RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 ISL1P61371 349 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 ARF6P62330 175 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 GALEQ14376 348 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 KLHL22Q53GT1 634 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 TTC23Q5W5X9 447 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 DHRSXQ8N5I4 330 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 PACRGLQ8N7B6 248 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 POC1AQ8NBT0 407 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 OR52I1Q8NGK6 324 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 APH1BQ8WW43 257 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 BORCS8Q96FH0 119 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 MED30Q96HR3 178 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 GAFA1Q96PS6 74 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 CHST5Q9GZS9 411 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 DNTTIP1Q9H147 329 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 VCXQ9H320 206 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 FRRS1LQ9P0K9 344 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 SLC25A10Q9UBX3 287 aaPredicted RBP13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 SVEP1Q4LDE5 3571 aa13.15□□□□□ -0.3
PPFIA4-213ENST00000601609 A0A1W2PQ09 198 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 INMTO95050 263 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 SFTPBP07988 381 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 ALKBH1Q13686 389 aaKnown RBP13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 SMN1Q16637 294 aaKnown RBP13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 ZNF691Q5VV52 312 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 BRD3OSQ6XYD6 125 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 ZNF788Q6ZQV5 615 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 Q6ZSR3 168 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 USP43Q70EL4 1123 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 ANGPTL5Q86XS5 388 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 BCL6BQ8N143 479 aaPredicted RBP13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 ANGPTL6Q8NI99 470 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 CNIH3Q8TBE1 160 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 PELI1Q96FA3 418 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 ERVK13-1Q9NX77 482 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 RPUSD1Q9UJJ7 312 aaKnown RBP13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 HHLA2Q9UM44 414 aa13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 FBN1P35555 2871 aaKnown RBP13.14□□□□□ -0.31
PPFIA4-213ENST00000601609 COL6A5A8TX70 2615 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 IRGMA1A4Y4 181 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 GPR37O15354 613 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 SIGLEC5O15389 551 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 IGHA1P01876 353 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 PGA5P0DJD9 388 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 PSG2P11465 335 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 AMY2BP19961 511 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 TGM4P49221 684 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 POU3F4P49335 361 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 FUT6P51993 359 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 GBX2P52951 348 aaPredicted RBP13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 BAMBIQ13145 260 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 UBE2V2Q15819 145 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 DGUOKQ16854 277 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 ATPAF1Q5TC12 328 aaPredicted RBP13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 ACP7Q6ZNF0 438 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 CALHM1Q8IU99 346 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 CMTM4Q8IZR5 234 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 SYS1Q8N2H4 156 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 TSEN15Q8WW01 171 aaKnown RBP13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 PP6455Q8WZ26 134 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 LHX4Q969G2 390 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 FGGYQ96C11 551 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 C10orf35Q96D05 121 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 COMMD4Q9H0A8 199 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 CNTD2Q9H8S5 307 aa13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 ISG20L2Q9H9L3 353 aaKnown RBP13.13□□□□□ -0.31
PPFIA4-213ENST00000601609 MXRA5Q9NR99 2828 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 RFPL4AA6NLU0 287 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 RFPL4AL1F8VTS6 287 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 SLC1A7O00341 560 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 WBP4O75554 376 aaKnown RBP13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 FCN3O75636 299 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 ACAA1P09110 424 aaPredicted RBP13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 CCDC159P0C7I6 412 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 MYL12AP19105 171 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 CEBPDP49716 269 aaPredicted RBP13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 CCR9P51686 369 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 ATP1B3P54709 279 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 MRPL28Q13084 256 aaKnown RBP13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 C11orf91Q3C1V1 193 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 RUSC1-AS1Q66K80 236 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 PDZD9Q8IXQ8 264 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 ZNRF1Q8ND25 227 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 SLAMF9Q96A28 289 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 ADAT3Q96EY9 351 aaPredicted RBP13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 DCTN5Q9BTE1 182 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 PKIBQ9C010 78 aa13.12□□□□□ -0.31
PPFIA4-213ENST00000601609 ELL3Q9HB65 397 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms