RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 PGA5P0DJD9 388 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 SLC25A16P16260 332 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 FSTP19883 344 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 GABRA5P31644 462 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 CD80P33681 288 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 GPR6P46095 362 aaPredicted RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 HAAOP46952 286 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 NPBWR2P48146 333 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 IL24Q13007 206 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 CARTPTQ16568 116 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 HAGHLQ6PII5 290 aaPredicted RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 FAM90A1Q86YD7 464 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 Q8NFD4 153 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 OR10Z1Q8NGY1 313 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 TSEN15Q8WW01 171 aaKnown RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 UFD1Q92890 307 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 TMIGD2Q96BF3 282 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 C1orf147Q96MC9 270 aaPredicted RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 HIST1H2AAQ96QV6 131 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 SMR3AQ99954 134 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 NRIP2Q9BQI9 281 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 PKIBQ9C010 78 aa8.84□□□□□ -0.99
LIG1-210ENST00000596332 YLPM1P49750 1951 aaKnown RBP8.84□□□□□ -0.99
LIG1-210ENST00000596332 MED13LQ71F56 2210 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PPIAL4EA0A075B759 164 aa8.83□□□□□ -1
LIG1-210ENST00000596332 IGHV3OR15-7A0A075B7D8 119 aa8.83□□□□□ -1
LIG1-210ENST00000596332 A0A087WXM4 84 aa8.83□□□□□ -1
LIG1-210ENST00000596332 A0A1B0GW55 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 FAM157AC9JC47 383 aa8.83□□□□□ -1
LIG1-210ENST00000596332 CLDN25C9JDP6 229 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PPIAL4DF5H284 164 aa8.83□□□□□ -1
LIG1-210ENST00000596332 J3QT63 122 aa8.83□□□□□ -1
LIG1-210ENST00000596332 GATBO75879 557 aaKnown RBP8.83□□□□□ -1
LIG1-210ENST00000596332 WNT2P09544 360 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L2P0CJ85 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L3P0CJ86 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L4P0CJ87 422 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L5P0CJ88 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L6P0CJ89 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L7P0CJ90 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PPIAL4FP0DN26 164 aa8.83□□□□□ -1
LIG1-210ENST00000596332 ZNF20P17024 532 aa8.83□□□□□ -1
LIG1-210ENST00000596332 USF1P22415 310 aaPredicted RBP8.83□□□□□ -1
LIG1-210ENST00000596332 PRKACBP22694 351 aa8.83□□□□□ -1
LIG1-210ENST00000596332 RBP2P50120 134 aa8.83□□□□□ -1
LIG1-210ENST00000596332 SEC61A1P61619 476 aaKnown RBP8.83□□□□□ -1
LIG1-210ENST00000596332 BTG1P62324 171 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PDZK1IP1Q13113 114 aa8.83□□□□□ -1
LIG1-210ENST00000596332 KISS1Q15726 138 aa8.83□□□□□ -1
LIG1-210ENST00000596332 NEDD8Q15843 81 aa8.83□□□□□ -1
LIG1-210ENST00000596332 ZNF404Q494X3 552 aa8.83□□□□□ -1
LIG1-210ENST00000596332 SFRP4Q6FHJ7 346 aaPredicted RBP8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4L9Q6RFH8 374 aaPredicted RBP8.83□□□□□ -1
LIG1-210ENST00000596332 CEACAM19Q7Z692 300 aa8.83□□□□□ -1
LIG1-210ENST00000596332 NR2C2APQ86WQ0 139 aa8.83□□□□□ -1
LIG1-210ENST00000596332 ZNF573Q86YE8 665 aa8.83□□□□□ -1
LIG1-210ENST00000596332 POC1AQ8NBT0 407 aa8.83□□□□□ -1
LIG1-210ENST00000596332 LRRC29Q8WV35 223 aa8.83□□□□□ -1
LIG1-210ENST00000596332 FCGR1BQ92637 280 aa8.83□□□□□ -1
LIG1-210ENST00000596332 SPSB1Q96BD6 273 aa8.83□□□□□ -1
LIG1-210ENST00000596332 YIPF6Q96EC8 236 aa8.83□□□□□ -1
LIG1-210ENST00000596332 TECTBQ96PL2 329 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PLEKHA1Q9HB21 404 aa8.83□□□□□ -1
LIG1-210ENST00000596332 CTSZQ9UBR2 303 aa8.83□□□□□ -1
LIG1-210ENST00000596332 DUX4Q9UBX2 424 aa8.83□□□□□ -1
LIG1-210ENST00000596332 ZNF222Q9UK12 451 aa8.83□□□□□ -1
LIG1-210ENST00000596332 FOXJ3Q9UPW0 622 aa8.83□□□□□ -1
LIG1-210ENST00000596332 PPIAL4AQ9Y536 164 aa8.83□□□□□ -1
LIG1-210ENST00000596332 IGKV1D-17A0A075B6S4 117 aa8.82□□□□□ -1
LIG1-210ENST00000596332 TRDV1A0A1B0GX56 115 aa8.82□□□□□ -1
LIG1-210ENST00000596332 KIAA1324LA8MWY0 1029 aaPredicted RBP8.82□□□□□ -1
LIG1-210ENST00000596332 LGALS8O00214 317 aa8.82□□□□□ -1
LIG1-210ENST00000596332 CCRL2O00421 344 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SPRY1O43609 319 aaPredicted RBP8.82□□□□□ -1
LIG1-210ENST00000596332 ANGPTL7O43827 346 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SERPINA3P01011 423 aa8.82□□□□□ -1
LIG1-210ENST00000596332 IGHV2-5P01817 119 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SFTPBP07988 381 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SRMP19623 302 aa8.82□□□□□ -1
LIG1-210ENST00000596332 RAB3AP20336 220 aa8.82□□□□□ -1
LIG1-210ENST00000596332 ZFP36P26651 326 aaKnown RBP8.82□□□□□ -1
LIG1-210ENST00000596332 PSMB9P28065 219 aa8.82□□□□□ -1
LIG1-210ENST00000596332 ALDH3B2P48448 385 aa8.82□□□□□ -1
LIG1-210ENST00000596332 ATP1B3P54709 279 aa8.82□□□□□ -1
LIG1-210ENST00000596332 MTCP1P56278 107 aa8.82□□□□□ -1
LIG1-210ENST00000596332 PAX2Q02962 417 aa8.82□□□□□ -1
LIG1-210ENST00000596332 MZT1Q08AG7 82 aa8.82□□□□□ -1
LIG1-210ENST00000596332 CNN3Q15417 329 aaKnown RBP8.82□□□□□ -1
LIG1-210ENST00000596332 TMEM155Q4W5P6 130 aa8.82□□□□□ -1
LIG1-210ENST00000596332 ATPAF1Q5TC12 328 aaPredicted RBP8.82□□□□□ -1
LIG1-210ENST00000596332 STUMQ69YW2 141 aa8.82□□□□□ -1
LIG1-210ENST00000596332 FAM166AQ6J272 317 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SLC25A26Q70HW3 274 aa8.82□□□□□ -1
LIG1-210ENST00000596332 FGFRL1Q8N441 504 aa8.82□□□□□ -1
LIG1-210ENST00000596332 CD177Q8N6Q3 437 aa8.82□□□□□ -1
LIG1-210ENST00000596332 DEFB108BQ8NET1 73 aa8.82□□□□□ -1
LIG1-210ENST00000596332 ANGPTL6Q8NI99 470 aa8.82□□□□□ -1
LIG1-210ENST00000596332 SLC25A28Q96A46 364 aa8.82□□□□□ -1
LIG1-210ENST00000596332 RFT1Q96AA3 541 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms