RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NKX6-3A6NJ46 265 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 SYNGR1O43759 233 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 IGHA1P01876 353 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 DBTP11182 482 aaKnown RBP10.76□□□□□ -0.69
USE1-207ENST00000596136 SELLP14151 372 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 HAAOP46952 286 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 OR12D2P58182 307 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 ERVK11-1P61568 191 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 ARF6P62330 175 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 ZNF91Q05481 1191 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 UBE2V2Q15819 145 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 ZSCAN26Q16670 478 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 DGUOKQ16854 277 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 GPR157Q5UAW9 335 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 TMEM244Q5VVB8 128 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 METTL11BQ5VVY1 283 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 METAP1DQ6UB28 335 aaPredicted RBP10.76□□□□□ -0.69
USE1-207ENST00000596136 ACP7Q6ZNF0 438 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 KIR3DL3Q8N743 410 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 NRIP2Q9BQI9 281 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 PCGF1Q9BSM1 259 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 PKIBQ9C010 78 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 CHST5Q9GZS9 411 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 FRRS1LQ9P0K9 344 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 POLDIP2Q9Y2S7 368 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 MAB21L2Q9Y586 359 aa10.76□□□□□ -0.69
USE1-207ENST00000596136 SOX21Q9Y651 276 aaPredicted RBP10.76□□□□□ -0.69
USE1-207ENST00000596136 LOC107986453A0A1B0GWG9 222 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 DNAJC9-AS1A6NH13 148 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 BAG2O95816 211 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 TFF1P04155 84 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
USE1-207ENST00000596136 FUT6P51993 359 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 NANOS3P60323 173 aaKnown RBP10.75□□□□□ -0.69
USE1-207ENST00000596136 GMFBP60983 142 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 ACTA2P62736 377 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 ACTG2P63267 376 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 RAB40BQ12829 278 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 IL24Q13007 206 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 IKZF1Q13422 519 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 GALEQ14376 348 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 ODF4Q2M2E3 257 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 SMIM21Q3B7S5 101 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 LPCAT4Q643R3 524 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 BRD3OSQ6XYD6 125 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 CALHM1Q8IU99 346 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 RDH10Q8IZV5 341 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 APH1BQ8WW43 257 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 PP6455Q8WZ26 134 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 STMN2Q93045 179 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 PELI1Q96FA3 418 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 MYCBPQ99417 103 aaPredicted RBP10.75□□□□□ -0.69
USE1-207ENST00000596136 ADI1Q9BV57 179 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 UNKLQ9H9P5 680 aaKnown RBP10.75□□□□□ -0.69
USE1-207ENST00000596136 INPP5EQ9NRR6 644 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 SMPD3Q9NY59 655 aaPredicted RBP10.75□□□□□ -0.69
USE1-207ENST00000596136 SLC25A10Q9UBX3 287 aaPredicted RBP10.75□□□□□ -0.69
USE1-207ENST00000596136 MYRFQ9Y2G1 1151 aa10.75□□□□□ -0.69
USE1-207ENST00000596136 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 OR4C45A6NMZ5 311 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 GATBO75879 557 aaKnown RBP10.74□□□□□ -0.69
USE1-207ENST00000596136 FADS2O95864 444 aaKnown RBP10.74□□□□□ -0.69
USE1-207ENST00000596136 SERPINA3P01011 423 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 BAMBIQ13145 260 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 SLC9A3R2Q15599 337 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 DEFB112Q30KQ8 113 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 UTS2BQ765I0 119 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 ANGPTL5Q86XS5 388 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 CD177Q8N6Q3 437 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 Q8N7P7 452 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 ZNRF1Q8ND25 227 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 DNAAF1Q8NEP3 725 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 GATAD2BQ8WXI9 593 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 MRPL48Q96GC5 212 aaKnown RBP10.74□□□□□ -0.69
USE1-207ENST00000596136 ZNF488Q96MN9 340 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 JAM3Q9BX67 310 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 PLEKHA1Q9HB21 404 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 NOX4Q9NPH5 578 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 C8orf4Q9NR00 106 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 SLC7A11Q9UPY5 501 aa10.74□□□□□ -0.69
USE1-207ENST00000596136 RPL36Q9Y3U8 105 aaKnown RBP10.74□□□□□ -0.69
USE1-207ENST00000596136 IGKV1-27A0A075B6S5 117 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 TRBV23-1A0A0A0MS06 115 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 RFPL4AA6NLU0 287 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 RFPL4AL1F8VTS6 287 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 J3QLW9 94 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 M0R1W7 72 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 WBP4O75554 376 aaKnown RBP10.73□□□□□ -0.69
USE1-207ENST00000596136 HTR1AP08908 422 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 HKR1P10072 659 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 ZNF19P17023 458 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 PRDX2P32119 198 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 GABRA2P47869 451 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 ACTG1P63261 375 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 ALKBH1Q13686 389 aaKnown RBP10.73□□□□□ -0.69
USE1-207ENST00000596136 KLHL22Q53GT1 634 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 C12orf54Q6X4T0 127 aa10.73□□□□□ -0.69
USE1-207ENST00000596136 Q6YL49 198 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms