RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZNF404Q494X3 552 aa16.24■□□□□ 0.19
PNKP-207ENST00000596014 YIF1BQ5BJH7 314 aa16.24■□□□□ 0.19
PNKP-207ENST00000596014 PARP16Q8N5Y8 322 aa16.24■□□□□ 0.19
PNKP-207ENST00000596014 UFD1Q92890 307 aa16.24■□□□□ 0.19
PNKP-207ENST00000596014 SLC7A11Q9UPY5 501 aa16.24■□□□□ 0.19
PNKP-207ENST00000596014 A3GALT2U3KPV4 340 aa16.24■□□□□ 0.19
PNKP-207ENST00000596014 TEP1Q99973 2627 aaKnown RBP16.23■□□□□ 0.19
PNKP-207ENST00000596014 hCG_1807616A0A1W2PRN6 198 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 PQLC2LA1A4F0 135 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 J3QRK9 145 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 ZNF205O95201 554 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 IGHV2-70P01814 119 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 OCM2P0CE71 109 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 FOSL1P15407 271 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 PSMA1P25786 263 aaKnown RBP16.23■□□□□ 0.19
PNKP-207ENST00000596014 BTG1P62324 171 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 ZMYND11Q15326 602 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 FAM201AQ5SY85 155 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 WDR82Q6UXN9 313 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 SERPINA12Q8IW75 414 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 MFSD4AQ8N468 514 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 OR13C5Q8NGS8 318 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 TRMT10AQ8TBZ6 339 aaKnown RBP16.23■□□□□ 0.19
PNKP-207ENST00000596014 NPRL2Q8WTW4 380 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 NXF2Q9GZY0 626 aaKnown RBP16.23■□□□□ 0.19
PNKP-207ENST00000596014 NARFLQ9H6Q4 476 aa16.23■□□□□ 0.19
PNKP-207ENST00000596014 IGKV1-9A0A0C4DH69 117 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 LHBP01229 141 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 CD2P06729 351 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 ATF1P18846 271 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 CFHR2P36980 270 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 FUT6P51993 359 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 HOXA4Q00056 320 aaPredicted RBP16.22■□□□□ 0.19
PNKP-207ENST00000596014 TPBGQ13641 420 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 LRRC28Q86X40 367 aaPredicted RBP16.22■□□□□ 0.19
PNKP-207ENST00000596014 GCSAMQ8N6F7 178 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 OR5D14Q8NGL3 314 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 MMP27Q9H306 513 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 ZCCHC4Q9H5U6 513 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 METTL17Q9H7H0 456 aaPredicted RBP16.22■□□□□ 0.19
PNKP-207ENST00000596014 ABCA2Q9BZC7 2435 aa16.22■□□□□ 0.19
PNKP-207ENST00000596014 PPIAL4EA0A075B759 164 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 TRBV5-5A0A0J9YX44 114 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 FAM230AA0A1W2PPH8 454 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 ISPDA4D126 451 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 PPIAL4DF5H284 164 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 PPIAL4FP0DN26 164 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 RPS25P62851 125 aaKnown RBP16.21■□□□□ 0.19
PNKP-207ENST00000596014 GPR50Q13585 617 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 CNN3Q15417 329 aaKnown RBP16.21■□□□□ 0.19
PNKP-207ENST00000596014 HAGHLQ6PII5 290 aaPredicted RBP16.21■□□□□ 0.19
PNKP-207ENST00000596014 ZNF573Q86YE8 665 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 BOLLQ8N9W6 283 aaKnown RBP16.21■□□□□ 0.19
PNKP-207ENST00000596014 OR13C9Q8NGT0 318 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 CLDND2Q8NHS1 167 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 LRRC29Q8WV35 223 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 TMEM106AQ96A25 262 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 TMEM165Q9HC07 324 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 SSR3Q9UNL2 185 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 PPIAL4AQ9Y536 164 aa16.21■□□□□ 0.19
PNKP-207ENST00000596014 FSTL3O95633 263 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 MDH2P40926 338 aaKnown RBP16.21■□□□□ 0.18
PNKP-207ENST00000596014 HAAOP46952 286 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 Q499Y3 187 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 ASPHD2Q6ICH7 369 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 C16orf87Q6PH81 154 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 C19orf18Q8NEA5 215 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 DNAAF1Q8NEP3 725 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 AQP3Q92482 292 aa16.21■□□□□ 0.18
PNKP-207ENST00000596014 IGKV1-27A0A075B6S5 117 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 RHBDL1O75783 438 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 ALX3O95076 343 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 PRKACBP22694 351 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 AZGP1P25311 298 aaKnown RBP16.2■□□□□ 0.18
PNKP-207ENST00000596014 IL2RGP31785 369 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 SOX6P35712 828 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 TMEM249Q2WGJ8 235 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 CALHM1Q8IU99 346 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 MS4A15Q8N5U1 240 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 OR10Z1Q8NGY1 313 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 SPSB1Q96BD6 273 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 BORCS8Q96FH0 119 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 GAL3ST1Q99999 423 aa16.2■□□□□ 0.18
PNKP-207ENST00000596014 SF3B6Q9Y3B4 125 aaKnown RBP16.2■□□□□ 0.18
PNKP-207ENST00000596014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.2■□□□□ 0.187e-7■■■■□ 24.2
PNKP-207ENST00000596014 OCMP0CE72 109 aaPredicted RBP16.19■□□□□ 0.18
PNKP-207ENST00000596014 EGR1P18146 543 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 GABRA5P31644 462 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 RBP2P50120 134 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 LMO4P61968 165 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 TMEM155Q4W5P6 130 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 SFRP4Q6FHJ7 346 aaPredicted RBP16.19■□□□□ 0.18
PNKP-207ENST00000596014 ZNF529Q6P280 563 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 ANGPTL5Q86XS5 388 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 DEFB108BQ8NET1 73 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 ZNF671Q8TAW3 534 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 OR14A2Q96R54 314 aa16.19■□□□□ 0.18
PNKP-207ENST00000596014 C6orf62Q9GZU0 229 aaPredicted RBP16.19■□□□□ 0.18
PNKP-207ENST00000596014 TXNL4BQ9NX01 149 aaKnown RBP16.19■□□□□ 0.18
PNKP-207ENST00000596014 MTORP42345 2549 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms