RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 MSMBP08118 114 aa12□□□□□ -0.49
LIG1-208ENST00000595758 HSMCR30P0CW71 290 aa12□□□□□ -0.49
LIG1-208ENST00000595758 RPS2P15880 293 aaKnown RBP12□□□□□ -0.49
LIG1-208ENST00000595758 MPZP25189 248 aa12□□□□□ -0.49
LIG1-208ENST00000595758 RBP2P50120 134 aa12□□□□□ -0.49
LIG1-208ENST00000595758 MTCP1P56278 107 aa12□□□□□ -0.49
LIG1-208ENST00000595758 RPS11P62280 158 aaKnown RBP eCLIP12□□□□□ -0.49
LIG1-208ENST00000595758 Q499Y3 187 aa12□□□□□ -0.49
LIG1-208ENST00000595758 FAM166AQ6J272 317 aa12□□□□□ -0.49
LIG1-208ENST00000595758 LYPD2Q6UXB3 125 aa12□□□□□ -0.49
LIG1-208ENST00000595758 LHFPL2Q6ZUX7 228 aa12□□□□□ -0.49
LIG1-208ENST00000595758 NLRC3Q7RTR2 1065 aa12□□□□□ -0.49
LIG1-208ENST00000595758 CALHM1Q8IU99 346 aa12□□□□□ -0.49
LIG1-208ENST00000595758 OR51F2Q8NH61 342 aa12□□□□□ -0.49
LIG1-208ENST00000595758 TMEM106AQ96A25 262 aa12□□□□□ -0.49
LIG1-208ENST00000595758 SEH1LQ96EE3 360 aa12□□□□□ -0.49
LIG1-208ENST00000595758 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
LIG1-208ENST00000595758 PKIBQ9C010 78 aa12□□□□□ -0.49
LIG1-208ENST00000595758 WDR13Q9H1Z4 485 aa12□□□□□ -0.49
LIG1-208ENST00000595758 RASL12Q9NYN1 266 aa12□□□□□ -0.49
LIG1-208ENST00000595758 DNAJB11Q9UBS4 358 aa12□□□□□ -0.49
LIG1-208ENST00000595758 ABCA2Q9BZC7 2435 aa12□□□□□ -0.49
LIG1-208ENST00000595758 SONP18583 2426 aaKnown RBP11.99□□□□□ -0.49
LIG1-208ENST00000595758 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
LIG1-208ENST00000595758 ADAM20O43506 726 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 SULT1B1O43704 296 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 NOS1APO75052 506 aaPredicted RBP11.99□□□□□ -0.49
LIG1-208ENST00000595758 FOXH1O75593 365 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 PLATP00750 562 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 PGA5P0DJD9 388 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 RAB3AP20336 220 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 GLRA1P23415 457 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 IL24Q13007 206 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 GPR50Q13585 617 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 TBCEQ15813 527 aaPredicted RBP11.99□□□□□ -0.49
LIG1-208ENST00000595758 ESCO2Q56NI9 601 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 GLCCI1Q86VQ1 547 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 POC1AQ8NBT0 407 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 OR8B3Q8NGG8 313 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 UFD1Q92890 307 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 TMIGD2Q96BF3 282 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 C12orf43Q96C57 262 aaKnown RBP11.99□□□□□ -0.49
LIG1-208ENST00000595758 ZNF488Q96MN9 340 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 OR8B2Q96RD0 313 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 ISYNA1Q9NPH2 558 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 TAS2R4Q9NYW5 299 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 LRRC42Q9Y546 428 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 MALRD1Q5VYJ5 2156 aa11.99□□□□□ -0.49
LIG1-208ENST00000595758 TRAV20A0A0B4J274 112 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 ZNF879B4DU55 563 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 HCKP08631 526 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 ACAA1P09110 424 aaPredicted RBP11.98□□□□□ -0.49
LIG1-208ENST00000595758 ZFP36P26651 326 aaKnown RBP11.98□□□□□ -0.49
LIG1-208ENST00000595758 PITPNBP48739 271 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 POU3F4P49335 361 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 DVL1P1P54792 670 aaPredicted RBP11.98□□□□□ -0.49
LIG1-208ENST00000595758 SEC61A1P61619 476 aaKnown RBP11.98□□□□□ -0.49
LIG1-208ENST00000595758 LCN2P80188 198 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 TPBGQ13641 420 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 ASPHD2Q6ICH7 369 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 ZNF529Q6P280 563 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 SLC25A26Q70HW3 274 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 SVOPQ8N4V2 548 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 MS4A15Q8N5U1 240 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 OR5T2Q8NGG2 359 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 TMEM186Q96B77 213 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 SPACA5Q96QH8 159 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 OR14A2Q96R54 314 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 CCL13Q99616 98 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 MGLLQ99685 303 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 NRIP2Q9BQI9 281 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 ACOT13Q9NPJ3 140 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 SNTG1Q9NSN8 517 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 NLKQ9UBE8 527 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 CKLFQ9UBR5 152 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 LRCH1Q9Y2L9 728 aa11.98□□□□□ -0.49
LIG1-208ENST00000595758 NSD1Q96L73 2696 aaPredicted RBP11.98□□□□□ -0.49
LIG1-208ENST00000595758 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 A0A1W2PPK0 400 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 OR2AT4A6NND4 320 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 MAGEB3O15480 346 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 PHF1O43189 567 aaPredicted RBP11.97□□□□□ -0.49
LIG1-208ENST00000595758 NXPH2O95156 264 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 CYB5AP00167 134 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 GNB2P62879 340 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 PPP3R1P63098 170 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 EMX1Q04741 257 aaPredicted RBP11.97□□□□□ -0.49
LIG1-208ENST00000595758 MLLT11Q13015 90 aaPredicted RBP11.97□□□□□ -0.49
LIG1-208ENST00000595758 PDZK1IP1Q13113 114 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 SMIM21Q3B7S5 101 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 ATPAF1Q5TC12 328 aaPredicted RBP11.97□□□□□ -0.49
LIG1-208ENST00000595758 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 STUMQ69YW2 141 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 ACP7Q6ZNF0 438 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 ZNF367Q7RTV3 350 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 MKXQ8IYA7 352 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 SPARTQ8N0X7 666 aa11.97□□□□□ -0.49
LIG1-208ENST00000595758 OR51A2Q8NGJ7 313 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms