RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 A0A087WV48 116 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 ARPC4-TTLL3A0A0A6YYG9 625 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 ZFP92A6NM28 416 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 GABRPO00591 440 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 HSD17B6O14756 317 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 WDR31Q8NA23 367 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 HPSE2Q8WWQ2 592 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 CD300AQ9UGN4 299 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 TFAP2AP05549 437 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 OR8U9P0C7N5 309 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 MUC1P15941 1255 aaPredicted RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 SLC16A12Q6ZSM3 486 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 OR4S2Q8NH73 311 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 MITFO75030 526 aaPredicted RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 ANKRD55Q3KP44 614 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 SEZ6L2Q6UXD5 910 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 C17orf82Q86X59 251 aaPredicted RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 WDYHV1Q96HA8 205 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 PBDC1Q9BVG4 233 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 C20orf85Q9H1P6 137 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 MSL2Q9HCI7 577 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 SLC35D1Q9NTN3 355 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 LSM5Q9Y4Y9 91 aaKnown RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 FXYD6-FXYD2A0A087WZ82 144 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 TCF21O43680 179 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 SS18L1O75177 396 aaPredicted RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 CD80P33681 288 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 ZNF45Q02386 682 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 ELP2Q6IA86 826 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 PRR14Q9BWN1 585 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 FXYD6Q9H0Q3 95 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 TUBB1Q9H4B7 451 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 SCPEP1Q9HB40 452 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 C7orf72A4D263 438 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 TMEM200CA6NKL6 621 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 RER1O15258 196 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 CCL2P13500 99 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 VDAC2P45880 294 aaPredicted RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 CD226Q15762 336 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 ACSM6Q6P461 480 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 CCDC28AQ8IWP9 274 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 PINX1Q96BK5 328 aaKnown RBP10□□□□□ -0.81
SEH1L-208ENST00000590843 SULT4A1Q9BR01 284 aa10□□□□□ -0.81
SEH1L-208ENST00000590843 COL4A1P02462 1669 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 NUPL2O15504 423 aaKnown RBP9.99□□□□□ -0.81
SEH1L-208ENST00000590843 FADS1O60427 444 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 LIMS1P48059 325 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 UBE2G2P60604 165 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 HEPHL1Q6MZM0 1159 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 RTN4RL2Q86UN3 420 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 C20orf196Q8IYI0 205 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 ZNF75AQ96N20 296 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 ARPC5LQ9BPX5 153 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 TMEM147Q9BVK8 224 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 TMEM106BQ9NUM4 274 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 ZSCAN5BA6NJL1 495 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 CCNKO75909 580 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 GABRA5P31644 462 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 KDM4DQ6B0I6 523 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 NAA40Q86UY6 237 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 FBXL17Q9UF56 701 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 SIRT4Q9Y6E7 314 aaPredicted RBP9.99□□□□□ -0.81
SEH1L-208ENST00000590843 TCF20Q9UGU0 1960 aaKnown RBP9.99□□□□□ -0.81
SEH1L-208ENST00000590843 MUC6Q6W4X9 2439 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 OMGP23515 440 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
SEH1L-208ENST00000590843 LOXL3P58215 753 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 RHOBP62745 196 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 TNXAQ16473 311 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 ATPAF1Q5TC12 328 aaPredicted RBP9.99□□□□□ -0.81
SEH1L-208ENST00000590843 NMNAT2Q9BZQ4 307 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 AAMDCQ9H7C9 122 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 ASCL3Q9NQ33 180 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 TAS2R4Q9NYW5 299 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 OTOFQ9HC10 1997 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 A0A0G2JLM5 398 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 MDFIC2A0A1B0GVS7 189 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 A6NNC1 897 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 CDK1P06493 297 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 H2AFB2P0C5Z0 115 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 YBX1P67809 324 aaKnown RBP9.99□□□□□ -0.81
SEH1L-208ENST00000590843 ZG16BQ96DA0 208 aa9.99□□□□□ -0.81
SEH1L-208ENST00000590843 S100PP25815 95 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 PNLIPRP3Q17RR3 467 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 ECSCRQ19T08 205 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 CNTD2Q9H8S5 307 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 XKRY2A2RUG3 117 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 LRRC3CA6NJW4 275 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 PRAF2O60831 178 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 LINC00271P0C7V0 271 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 TAF9Q16594 264 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
SEH1L-208ENST00000590843 RNF122Q9H9V4 155 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 CDIPTO14735 213 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 PHF1O43189 567 aaPredicted RBP9.98□□□□□ -0.81
SEH1L-208ENST00000590843 LILRA1O75019 489 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 RAB9AP51151 201 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 ZNF136P52737 540 aa9.98□□□□□ -0.81
SEH1L-208ENST00000590843 RAE1P78406 368 aaKnown RBP9.98□□□□□ -0.81
SEH1L-208ENST00000590843 ATXN7L3Q14CW9 347 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms