RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 OR10AC1Q8NH08 325 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 TRMT10AQ8TBZ6 339 aaKnown RBP9.91□□□□□ -0.82
LIG3-213ENST00000590630 RPS4Y2Q8TD47 263 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 SPSB1Q96BD6 273 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 FGGYQ96C11 551 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 TMPRSS13Q9BYE2 586 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 PKIBQ9C010 78 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 WDR13Q9H1Z4 485 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 MMP26Q9NRE1 261 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 FKBP14Q9NWM8 211 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 CTSZQ9UBR2 303 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 CLEC2DQ9UHP7 191 aa9.91□□□□□ -0.82
LIG3-213ENST00000590630 IGHV2-70DA0A0C4DH43 119 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 NKX6-3A6NJ46 265 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 OR2AT4A6NND4 320 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 MYL12BO14950 172 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 NOS1APO75052 506 aaPredicted RBP9.9□□□□□ -0.82
LIG3-213ENST00000590630 ACAA1P09110 424 aaPredicted RBP9.9□□□□□ -0.82
LIG3-213ENST00000590630 PGA5P0DJD9 388 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 PRKACBP22694 351 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 C21orf33P30042 268 aaPredicted RBP9.9□□□□□ -0.82
LIG3-213ENST00000590630 SRP14P37108 136 aaKnown RBP9.9□□□□□ -0.82
LIG3-213ENST00000590630 VHLP40337 213 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 RBP2P50120 134 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 TAS2R43P59537 309 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 GMFBP60983 142 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 PAX2Q02962 417 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 IL24Q13007 206 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 SCGB2A2Q13296 93 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 SMIM21Q3B7S5 101 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 CD276Q5ZPR3 534 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 XAF1Q6GPH4 301 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 CALHM1Q8IU99 346 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 PARP16Q8N5Y8 322 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 POC1AQ8NBT0 407 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 ZNF485Q8NCK3 441 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 NPRL2Q8WTW4 380 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 TSEN15Q8WW01 171 aaKnown RBP9.9□□□□□ -0.82
LIG3-213ENST00000590630 GATAD2BQ8WXI9 593 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 MYDGFQ969H8 173 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 DACT3Q96B18 629 aaPredicted RBP9.9□□□□□ -0.82
LIG3-213ENST00000590630 TMIGD2Q96BF3 282 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 SMIM19Q96E16 107 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 SEH1LQ96EE3 360 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 BORCS8Q96FH0 119 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 NRIP2Q9BQI9 281 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 MRI1Q9BV20 369 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 C7orf69Q9H7B7 122 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 SCN3BQ9NY72 215 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 NLKQ9UBE8 527 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 DHDHQ9UQ10 334 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 INSIG2Q9Y5U4 225 aa9.9□□□□□ -0.82
LIG3-213ENST00000590630 IGKV1-27A0A075B6S5 117 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 LOC105371242A0A075B767 164 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 IGKV1-9A0A0C4DH69 117 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 DVL1O14640 695 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 GPR37O15354 613 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 OGG1O15527 345 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 SYNGR1O43759 233 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 ENSAO43768 121 aaKnown RBP9.89□□□□□ -0.83
LIG3-213ENST00000590630 ALX3O95076 343 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 ECDO95905 644 aaPredicted RBP9.89□□□□□ -0.83
LIG3-213ENST00000590630 MT-ND2P03891 347 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 CDK1P06493 297 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 CD2P06729 351 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 OCM2P0CE71 109 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 OCMP0CE72 109 aaPredicted RBP9.89□□□□□ -0.83
LIG3-213ENST00000590630 ATF1P18846 271 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 AZGP1P25311 298 aaKnown RBP9.89□□□□□ -0.83
LIG3-213ENST00000590630 ATP1B3P54709 279 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 WNT4P56705 351 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 RNLSQ5VYX0 342 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 C1orf229Q6ZS94 237 aaPredicted RBP9.89□□□□□ -0.83
LIG3-213ENST00000590630 LHFPL2Q6ZUX7 228 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 PRIMA1Q86XR5 153 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 ANGPTL5Q86XS5 388 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 SERPINA12Q8IW75 414 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 OR5T2Q8NGG2 359 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 OR5D14Q8NGL3 314 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 ANGPTL6Q8NI99 470 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 GPR148Q8TDV2 347 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 RAB40AQ8WXH6 277 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 MED30Q96HR3 178 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 OPALINQ96PE5 141 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 CCL13Q99616 98 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 ZCCHC4Q9H5U6 513 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 NEK6Q9HC98 313 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 SMURF1Q9HCE7 757 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 SNTG1Q9NSN8 517 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 RAB26Q9ULW5 256 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 ERGIC3Q9Y282 383 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 PCDHGB5Q9Y5G0 923 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 AUP1Q9Y679 476 aa9.89□□□□□ -0.83
LIG3-213ENST00000590630 KIR2DS1A0A191URI9 304 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 PTGES3LE9PB15 166 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 NDUFB3O43676 98 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 NXPH2O95156 264 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 LALBAP00709 142 aa9.88□□□□□ -0.83
LIG3-213ENST00000590630 AVPP01185 164 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms