RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 TSEN15Q8WW01 171 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 NRG4Q8WWG1 115 aa11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 H1FXQ92522 213 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 C12orf43Q96C57 262 aaKnown RBP11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 ADAT3Q96EY9 351 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 BORCS8Q96FH0 119 aa11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 CHST5Q9GZS9 411 aa11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 COMMD4Q9H0A8 199 aa11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 FGF20Q9NP95 211 aaPredicted RBP11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 HHLA2Q9UM44 414 aa11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 STAB1Q9NY15 2570 aa11.66□□□□□ -0.54
SCAMP4-212ENST00000590266 FBN1P35555 2871 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 TRBV2A0A0J9YWF9 115 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 IRGMA1A4Y4 181 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 OR4C45A6NMZ5 311 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 OR2AT4A6NND4 320 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 TCF21O43680 179 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 XPNPEP2O43895 674 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 NXPH2O95156 264 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 ATP6V1G2O95670 118 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 DCKP27707 260 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 CAPZA1P52907 286 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 AQP4P55087 323 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 FGF12P61328 243 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 PAX2Q02962 417 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 LRRC10Q5BKY1 277 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 CALHM1Q8IU99 346 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 BPIFB2Q8N4F0 458 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 POC1AQ8NBT0 407 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 BPIFB6Q8NFQ5 453 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 OR5AK2Q8NH90 309 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 PP6455Q8WZ26 134 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 SLAMF9Q96A28 289 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 TMEM80Q96HE8 168 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 SLC6A7Q99884 636 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 PDCD1LG2Q9BQ51 273 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 ZNF649Q9BS31 505 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 KAAG1Q9UBP8 84 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 EXOSC1Q9Y3B2 195 aaKnown RBP11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
SCAMP4-212ENST00000590266 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 TRAV40A0A0B4J280 105 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 KIR2DS1A0A191URI9 304 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 TMEM212A6NML5 194 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 FCN3O75636 299 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 ZFPL1O95159 310 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 ISG15P05161 165 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 CCDC159P0C7I6 412 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 NDUFB7P17568 137 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 AMY2BP19961 511 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 POU3F4P49335 361 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 CEBPDP49716 269 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 FUT6P51993 359 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 IL13RA1P78552 427 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 PAX8Q06710 450 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 MED21Q13503 144 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 XAF1Q6GPH4 301 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 AHSA2Q719I0 299 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 PNLDC1Q8NA58 520 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 OR13C9Q8NGT0 318 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 ANGPTL6Q8NI99 470 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 ZNF418Q8TF45 676 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 GGHQ92820 318 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 RFT1Q96AA3 541 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 C10orf35Q96D05 121 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 GAFA1Q96PS6 74 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 ONECUT1Q9UBC0 465 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 CLEC2DQ9UHP7 191 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 DIMT1Q9UNQ2 313 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 DHDHQ9UQ10 334 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 CAB39Q9Y376 341 aaPredicted RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 HSPE1-MOB4S4R3N1 261 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 YLPM1P49750 1951 aaKnown RBP11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
SCAMP4-212ENST00000590266 CUBNO60494 3623 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 MXRA5Q9NR99 2828 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 IGKV1D-17A0A075B6S4 117 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 RFPL4AA6NLU0 287 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 RFPL4AL1F8VTS6 287 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 SFTPBP07988 381 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 PGA5P0DJD9 388 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 IGHV4-38-2P0DP08 117 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 PSG2P11465 335 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 ATF1P18846 271 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 AZGP1P25311 298 aaKnown RBP11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 SOX2P48431 317 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 RBP2P50120 134 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 ATP1B3P54709 279 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 MTCP1P56278 107 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 ST3GAL4Q11206 333 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 DGUOKQ16854 277 aa11.63□□□□□ -0.55
SCAMP4-212ENST00000590266 KLF17Q5JT82 389 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms