RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ITPKCQ96DU7 683 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 Q96MF0 132 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 RTL8AQ9BWD3 113 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 BARHL1Q9BZE3 327 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 GHRLQ9UBU3 117 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 SLC7A11Q9UPY5 501 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 PPP1R3CQ9UQK1 317 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 AK6Q9Y3D8 172 aaKnown RBP13.12□□□□□ -0.31
SS18-216ENST00000580751 PEX16Q9Y5Y5 336 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 CELSR1Q9NYQ6 3014 aa13.12□□□□□ -0.31
SS18-216ENST00000580751 H3BSH0 61 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 SLC17A2O00624 439 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 LMX1BO60663 402 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 RP2O75695 350 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 PTBP3O95758 552 aaKnown RBP13.11□□□□□ -0.31
SS18-216ENST00000580751 MAS1P04201 325 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 CALCBP10092 127 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 SLC25A16P16260 332 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 GIFP27352 417 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 MAB21L1Q13394 359 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 PLCXD3Q63HM9 321 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 OR5A2Q8NGI9 324 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 OR13C9Q8NGT0 318 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 HPS1Q92902 700 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 ETV7Q9Y603 341 aa13.11□□□□□ -0.31
SS18-216ENST00000580751 OR5B21A6NL26 309 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 TMEM210A6NLX4 147 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 LRRC30A6NM36 301 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 CLDN25C9JDP6 229 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 LYNX1G3V0Z9 82 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 UBBP0CG47 229 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 LYNX1P0DP58 116 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 COL8A2P25067 703 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 RBP2P50120 134 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 TMEM33P57088 247 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 UBE2V2Q15819 145 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 CEACAM21Q3KPI0 293 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 SPRNQ5BIV9 151 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 FAM166AQ6J272 317 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
SS18-216ENST00000580751 HPSE2Q8WWQ2 592 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 CCL17Q92583 94 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 FN3KRPQ9HA64 309 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 STEAP1Q9UHE8 339 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 TANC2Q9HCD6 1990 aa13.1□□□□□ -0.31
SS18-216ENST00000580751 VPS13CQ709C8 3753 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 IGHV4-30-2A0A087WSY4 118 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 IGKV1-9A0A0C4DH69 117 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 AZGP1P25311 298 aaKnown RBP13.09□□□□□ -0.31
SS18-216ENST00000580751 S100A5P33763 92 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 ZNF93P35789 620 aaPredicted RBP13.09□□□□□ -0.31
SS18-216ENST00000580751 OR10A3P58181 314 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 GNG3P63215 75 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 LSAMPQ13449 338 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 FAM189A2Q15884 450 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 ZNF181Q2M3W8 571 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 PRAMEF6Q5VXH4 476 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 MOB3CQ70IA8 216 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 MOGAT3Q86VF5 341 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 TGIF2LYQ8IUE0 185 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 OR51A2Q8NGJ7 313 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 OR11L1Q8NGX0 322 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 Q8TCH9 128 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 ORAI1Q96D31 301 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 TIMD4Q96H15 378 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 RNF170Q96K19 258 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 GFI1Q99684 422 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 PPP1R3EQ9H7J1 279 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 PLGRKTQ9HBL7 147 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 GPR173Q9NS66 373 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 FBLN5Q9UBX5 448 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 DAPK2Q9UIK4 370 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 ADAM30Q9UKF2 790 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 CACNG2Q9Y698 323 aa13.09□□□□□ -0.31
SS18-216ENST00000580751 LOC100289279A0A1B0GTE1 492 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 A6NIN4 97 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 A6NLC8 198 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
SS18-216ENST00000580751 GRPP07492 148 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 HCKP08631 526 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 IRF2P14316 349 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 HTR2CP28335 458 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 THBS2P35442 1172 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 NR4A2P43354 598 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
SS18-216ENST00000580751 ATP1B3P54709 279 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 ZNF154Q13106 437 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 KISS1Q15726 138 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 RAB11BQ15907 218 aa13.08□□□□□ -0.32
SS18-216ENST00000580751 IDNKQ5T6J7 187 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms