RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 CCDC54Q8NEL0 328 aa16.11■□□□□ 0.17
LIMD2-209ENST00000580222 OR14K1Q8NGZ2 314 aa16.11■□□□□ 0.17
LIMD2-209ENST00000580222 RPS4Y2Q8TD47 263 aa16.11■□□□□ 0.17
LIMD2-209ENST00000580222 MRI1Q9BV20 369 aa16.11■□□□□ 0.17
LIMD2-209ENST00000580222 PATZ1Q9HBE1 687 aaKnown RBP16.11■□□□□ 0.17
LIMD2-209ENST00000580222 HHLA2Q9UM44 414 aa16.11■□□□□ 0.17
LIMD2-209ENST00000580222 SIRT4Q9Y6E7 314 aaPredicted RBP16.11■□□□□ 0.17
LIMD2-209ENST00000580222 V9GYS6 101 aa16.11■□□□□ 0.17
LIMD2-209ENST00000580222 DNAH3Q8TD57 4116 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 A0A087WXM4 84 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 NDUFA7O95182 113 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 RPSAP08865 295 aaKnown RBP16.1■□□□□ 0.17
LIMD2-209ENST00000580222 CELP19835 753 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 GNALP38405 381 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 RIPPLY1Q0D2K3 151 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 MLLT11Q13015 90 aaPredicted RBP16.1■□□□□ 0.17
LIMD2-209ENST00000580222 FAM209AQ5JX71 171 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 PLPP7Q8NBV4 271 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 TSPAN14Q8NG11 270 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 OR10AC1Q8NH08 325 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 TSEN15Q8WW01 171 aaKnown RBP16.1■□□□□ 0.17
LIMD2-209ENST00000580222 FCGR1BQ92637 280 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 UFD1Q92890 307 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 ITFG2Q969R8 447 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 ADAT1Q9BUB4 502 aaKnown RBP16.1■□□□□ 0.17
LIMD2-209ENST00000580222 PAPOLGQ9BWT3 736 aaKnown RBP16.1■□□□□ 0.17
LIMD2-209ENST00000580222 CHIAQ9BZP6 476 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 PRDM13Q9H4Q3 707 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 TMEM100Q9NV29 134 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 MRPL15Q9P015 296 aaKnown RBP16.1■□□□□ 0.17
LIMD2-209ENST00000580222 ENPP5Q9UJA9 477 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 PIGLQ9Y2B2 252 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 NPTNQ9Y639 398 aa16.1■□□□□ 0.17
LIMD2-209ENST00000580222 ZNF816-ZNF321PA0A0X1KG74 233 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 FAHP16930 419 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 CA6P23280 308 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 TAF9Q16594 264 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 BRD3OSQ6XYD6 125 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 Q6ZR03 302 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 OR2Z1Q8NG97 314 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 OR10AD1Q8NGE0 317 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 OR13C3Q8NGS6 347 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 OR13G1Q8NGZ3 307 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 MGLLQ99685 303 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 SLC30A2Q9BRI3 323 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 SLC22A4Q9H015 551 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 ISYNA1Q9NPH2 558 aa16.09■□□□□ 0.17
LIMD2-209ENST00000580222 NOP16Q9Y3C1 178 aaKnown RBP16.09■□□□□ 0.17
LIMD2-209ENST00000580222 TENM3Q9P273 2699 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 DHRS7CA6NNS2 312 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 A8MXK9 166 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 SRRM5B3KS81 715 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 F5H0A9 414 aaPredicted RBP16.08■□□□□ 0.16
LIMD2-209ENST00000580222 ZNF20P17024 532 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 TNFSF4P23510 183 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 PSMB9P28065 219 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 OR8G1Q15617 311 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 ZBTB37Q5TC79 503 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 Q6ZSR3 168 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 OR51A4Q8NGJ6 313 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 PIGCQ92535 297 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 GHSRQ92847 366 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 UPRTQ96BW1 309 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 PGLYRP3Q96LB9 341 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 OPALINQ96PE5 141 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 DIRC2Q96SL1 478 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 VCX3AQ9NNX9 186 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 ZDHHC8Q9ULC8 765 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 DHDHQ9UQ10 334 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 RHBDD3Q9Y3P4 386 aa16.08■□□□□ 0.16
LIMD2-209ENST00000580222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.07■□□□□ 0.16
LIMD2-209ENST00000580222 H0YL77 283 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 MLNRO43193 412 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 HLA-DPB1P04440 258 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 TNFAIP6P98066 277 aaPredicted RBP16.07■□□□□ 0.16
LIMD2-209ENST00000580222 PRDX4Q13162 271 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 ZMYND11Q15326 602 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 NEDD8Q15843 81 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 UBE2UQ5VVX9 321 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 LIPKQ5VXJ0 399 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 KCTD8Q6ZWB6 473 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 OR13C5Q8NGS8 318 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 LINC01006Q8NI28 216 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 GPR148Q8TDV2 347 aa16.07■□□□□ 0.16
LIMD2-209ENST00000580222 RGP1Q92546 391 aaPredicted RBP16.07■□□□□ 0.16
LIMD2-209ENST00000580222 TRAV40A0A0B4J280 105 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 A6NIN4 97 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 ANXA2P2A6NMY6 339 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 ZNF850A8MQ14 1090 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 PIN1P1O15428 100 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 CST4P01036 141 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 CD1AP06126 327 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 SOX2P48431 317 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 PROK1P58294 105 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 YIF1BQ5BJH7 314 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 LRRC28Q86X40 367 aaPredicted RBP16.06■□□□□ 0.16
LIMD2-209ENST00000580222 ZDHHC23Q8IYP9 409 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 OR8S1Q8NH09 359 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 C10orf35Q96D05 121 aa16.06■□□□□ 0.16
LIMD2-209ENST00000580222 TMED9Q9BVK6 235 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms