RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CNN3Q15417 329 aaKnown RBP19.49■□□□□ 0.71
SNF8-217ENST00000576353 LRRC10Q5BKY1 277 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 ZNF788Q6ZQV5 615 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 BTN2A1Q7KYR7 527 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 BPIFB2Q8N4F0 458 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 FAM216BQ8N7L0 139 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 ANGPTL6Q8NI99 470 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 TRMT10AQ8TBZ6 339 aaKnown RBP19.49■□□□□ 0.71
SNF8-217ENST00000576353 PKIBQ9C010 78 aa19.49■□□□□ 0.71
SNF8-217ENST00000576353 NKX1-2Q9UD57 310 aaPredicted RBP19.49■□□□□ 0.71
SNF8-217ENST00000576353 SYNGR1O43759 233 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 ACAA1P09110 424 aaPredicted RBP19.48■□□□□ 0.71
SNF8-217ENST00000576353 CCDC159P0C7I6 412 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 MYL12AP19105 171 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 AMY2BP19961 511 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 MPZP25189 248 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 IL13RA1P78552 427 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 IKZF1Q13422 519 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 MED21Q13503 144 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 SMIM21Q3B7S5 101 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 TMPRSS11AQ6ZMR5 421 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 UTS2BQ765I0 119 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 NPRL2Q8WTW4 380 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 UPRTQ96BW1 309 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 FGGYQ96C11 551 aa19.48■□□□□ 0.71
SNF8-217ENST00000576353 ADAT3Q96EY9 351 aaPredicted RBP19.48■□□□□ 0.71
SNF8-217ENST00000576353 DIMT1Q9UNQ2 313 aaKnown RBP19.48■□□□□ 0.71
SNF8-217ENST00000576353 CAB39Q9Y376 341 aaPredicted RBP19.48■□□□□ 0.71
SNF8-217ENST00000576353 A0A1B0GW55 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 TMEM212A6NML5 194 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L2P0CJ85 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L3P0CJ86 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L4P0CJ87 422 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L5P0CJ88 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L6P0CJ89 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L7P0CJ90 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 PGA5P0DJD9 388 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 IL24Q13007 206 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 KLF17Q5JT82 389 aaPredicted RBP19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4L9Q6RFH8 374 aaPredicted RBP19.47■□□□□ 0.71
SNF8-217ENST00000576353 ACP7Q6ZNF0 438 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 USP43Q70EL4 1123 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 ANGPTL5Q86XS5 388 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 DNAAF1Q8NEP3 725 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 OR13C3Q8NGS6 347 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 BORCS8Q96FH0 119 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 SUCNR1Q9BXA5 334 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 COMMD4Q9H0A8 199 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 CHCHD3Q9NX63 227 aaKnown RBP19.47■□□□□ 0.71
SNF8-217ENST00000576353 DUX4Q9UBX2 424 aa19.47■□□□□ 0.71
SNF8-217ENST00000576353 EXOSC1Q9Y3B2 195 aaKnown RBP19.47■□□□□ 0.71
SNF8-217ENST00000576353 ZNF879B4DU55 563 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 E9PI62 339 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 SIGLEC5O15389 551 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 FCN3O75636 299 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 GNAO1P09471 354 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 PSG2P11465 335 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 PRKACBP22694 351 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 GABRA2P47869 451 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 ETV1P50549 477 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 FGF12P61328 243 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 CALHM1Q8IU99 346 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 OR5AK2Q8NH90 309 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 TFAP2CQ92754 450 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 TMEM80Q96HE8 168 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 DMRTB1Q96MA1 342 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 ZNF488Q96MN9 340 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 GAFA1Q96PS6 74 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 NRIP2Q9BQI9 281 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 RPUSD1Q9UJJ7 312 aaKnown RBP19.46■□□□□ 0.71
SNF8-217ENST00000576353 CUBNO60494 3623 aa19.46■□□□□ 0.71
SNF8-217ENST00000576353 FBN1P35555 2871 aaKnown RBP19.46■□□□□ 0.71
SNF8-217ENST00000576353 IGKV1D-17A0A075B6S4 117 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 TRBV2A0A0J9YWF9 115 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 NXPH2O95156 264 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 ZFPL1O95159 310 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 OCM2P0CE71 109 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 OCMP0CE72 109 aaPredicted RBP19.45■□□□□ 0.7
SNF8-217ENST00000576353 ATP1B3P54709 279 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 CCDC58Q4VC31 144 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 OR51A4Q8NGJ6 313 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 OR10AC1Q8NH08 325 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 JMJD8Q96S16 334 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 SLC6A7Q99884 636 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 CNTD2Q9H8S5 307 aa19.45■□□□□ 0.7
SNF8-217ENST00000576353 SLC25A10Q9UBX3 287 aaPredicted RBP19.45■□□□□ 0.7
SNF8-217ENST00000576353 COL6A5A8TX70 2615 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 EFCAB10A6NFE3 127 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 H0YJX3 145 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 ATF1P18846 271 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 RBP2P50120 134 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 SRSF2Q01130 221 aaKnown RBP19.44■□□□□ 0.7
SNF8-217ENST00000576353 DGUOKQ16854 277 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 METTL11BQ5VVY1 283 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 FBLIM1Q8WUP2 373 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 GGHQ92820 318 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 SPSB1Q96BD6 273 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 SDSLQ96GA7 329 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 NEK6Q9HC98 313 aa19.44■□□□□ 0.7
SNF8-217ENST00000576353 ZNF222Q9UK12 451 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms