RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 OR5V1Q9UGF6 321 aa12.71□□□□□ -0.37
LITAF-217ENST00000575426 CDC42EP3Q9UKI2 254 aa12.71□□□□□ -0.37
LITAF-217ENST00000575426 SIRT4Q9Y6E7 314 aaPredicted RBP12.71□□□□□ -0.37
LITAF-217ENST00000575426 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
LITAF-217ENST00000575426 PNMA8CA0A1B0GUJ8 204 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 MAGEB3O15480 346 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 DENRO43583 198 aaKnown RBP12.7□□□□□ -0.38
LITAF-217ENST00000575426 CYB5AP00167 134 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 LALBAP00709 142 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 GATA3P23771 443 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 CRHBPP24387 322 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
LITAF-217ENST00000575426 SOX2P48431 317 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 MTCP1P56278 107 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 CR1LQ2VPA4 569 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 DMKNQ6E0U4 476 aaPredicted RBP12.7□□□□□ -0.38
LITAF-217ENST00000575426 FAHD2BQ6P2I3 314 aaPredicted RBP12.7□□□□□ -0.38
LITAF-217ENST00000575426 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 SLC36A1Q7Z2H8 476 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 ANGPTL5Q86XS5 388 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 PARP16Q8N5Y8 322 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 ZNF485Q8NCK3 441 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 OR13C9Q8NGT0 318 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 RPS4Y2Q8TD47 263 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 GHSRQ92847 366 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 SPSB1Q96BD6 273 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 FAHD2AQ96GK7 314 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 OPALINQ96PE5 141 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 DUSP21Q9H596 190 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 SNTG1Q9NSN8 517 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
LITAF-217ENST00000575426 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 A0A0X1KG70 313 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 NKX6-3A6NJ46 265 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 TMPRSS2O15393 492 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 PHF1O43189 567 aaPredicted RBP12.69□□□□□ -0.38
LITAF-217ENST00000575426 SYNGR1O43759 233 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 CRLF1O75462 422 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 HCKP08631 526 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 CELP19835 753 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 ZFP36P26651 326 aaKnown RBP12.69□□□□□ -0.38
LITAF-217ENST00000575426 SEC61A1P61619 476 aaKnown RBP12.69□□□□□ -0.38
LITAF-217ENST00000575426 BDH1Q02338 343 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 IL24Q13007 206 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 SPHARQ15513 63 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 MED22Q15528 200 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 YIF1BQ5BJH7 314 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 FAM120AOSQ5T036 256 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 POC1AQ8NBT0 407 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 OR4M2Q8NGB6 313 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 OR5T2Q8NGG2 359 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 WDR13Q9H1Z4 485 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
LITAF-217ENST00000575426 KAAG1Q9UBP8 84 aa12.69□□□□□ -0.38
LITAF-217ENST00000575426 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
LITAF-217ENST00000575426 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 PPIAL4CA0A0B4J2A2 164 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 IGKV1-9A0A0C4DH69 117 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 OR2AT4A6NND4 320 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 A8MXK9 166 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 J3QLI3 93 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 TNFRSF13BO14836 293 aaPredicted RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 NDUFB3O43676 98 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 SULT1B1O43704 296 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 NOS1APO75052 506 aaPredicted RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 ALX3O95076 343 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 NXPH2O95156 264 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 PLATP00750 562 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 MT-ND2P03891 347 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 CD1AP06126 327 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 PGA5P0DJD9 388 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 RAB3AP20336 220 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 MPZP25189 248 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 GABRA2P47869 451 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 POU3F4P49335 361 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 RIPPLY3P57055 190 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 ACSM1Q08AH1 577 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 SMIM21Q3B7S5 101 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 CD276Q5ZPR3 534 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 WDR25Q64LD2 544 aaPredicted RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 SLC25A26Q70HW3 274 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 PRSS48Q7RTY5 328 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 CALHM1Q8IU99 346 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 TEX29Q8N6K0 151 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 SEH1LQ96EE3 360 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 CPNE2Q96FN4 548 aaPredicted RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 MED30Q96HR3 178 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 CCL13Q99616 98 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 DNTTIP1Q9H147 329 aa12.68□□□□□ -0.38
LITAF-217ENST00000575426 POLR3KQ9Y2Y1 108 aaPredicted RBP12.68□□□□□ -0.38
LITAF-217ENST00000575426 IGKV1-27A0A075B6S5 117 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 LOC105371242A0A075B767 164 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 TRAPPC2LH3BP13 241 aa12.67□□□□□ -0.38
LITAF-217ENST00000575426 ACAA1P09110 424 aaPredicted RBP12.67□□□□□ -0.38
LITAF-217ENST00000575426 SRP14P37108 136 aaKnown RBP12.67□□□□□ -0.38
LITAF-217ENST00000575426 PPP3R1P63098 170 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms