RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TMEM106AQ96A25 262 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 TMIGD2Q96BF3 282 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 OPALINQ96PE5 141 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 FGF23Q9GZV9 251 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 METTL17Q9H7H0 456 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 TMEM160Q9NX00 188 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 CKLFQ9UBR5 152 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 ABCA2Q9BZC7 2435 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 WNK2Q9Y3S1 2297 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 PNMA8CA0A1B0GUJ8 204 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 F5H0A9 414 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 ADAM20O43506 726 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 SULT1B1O43704 296 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 RHBDL1O75783 438 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 HCKP08631 526 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 ACAA1P09110 424 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 WNT2P09544 360 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 HNF1AP20823 631 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 GATA3P23771 443 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 MPZP25189 248 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 MAPK3P27361 379 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 SOX2P48431 317 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 GMFBP60983 142 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 GNB2P62879 340 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 PPP3R1P63098 170 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 IL24Q13007 206 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 HNRNPA0Q13151 305 aaKnown RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 IRF3Q14653 427 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 FAM90A1Q86YD7 464 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 MKXQ8IYA7 352 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 Q8IYB0 196 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 SVOPQ8N4V2 548 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 MS4A15Q8N5U1 240 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 ZFP41Q8N8Y5 198 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 C19orf18Q8NEA5 215 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 UFD1Q92890 307 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 TMEM186Q96B77 213 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 SSBP3Q9BWW4 388 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 DNTTIP1Q9H147 329 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 LPAR2Q9HBW0 351 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 ISYNA1Q9NPH2 558 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 CLN8Q9UBY8 286 aa10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC1-206ENST00000573989 MTORP42345 2549 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 A0A0G2JMP0 313 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 A0A0X1KG70 313 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 NKX6-3A6NJ46 265 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 TMPRSS2O15393 492 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 NOS1APO75052 506 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 NXPH2O95156 264 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 GYPAP02724 150 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 HSMCR30P0CW71 290 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 PGA5P0DJD9 388 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 EGR1P18146 543 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 PITPNBP48739 271 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 TBCEQ15813 527 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 FIP1L1Q6UN15 594 aaKnown RBP10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 ANGPTL5Q86XS5 388 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 CALHM1Q8IU99 346 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 POC1AQ8NBT0 407 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 OR4M2Q8NGB6 313 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 RGP1Q92546 391 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 SGCDQ92629 289 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 MED30Q96HR3 178 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 PGLYRP3Q96LB9 341 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 OR5M11Q96RB7 305 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 HIF1ANQ9NWT6 349 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 NLKQ9UBE8 527 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 KAAG1Q9UBP8 84 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 LPAR3Q9UBY5 353 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 OR5V1Q9UGF6 321 aa10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 LSM2Q9Y333 95 aaKnown RBP10.67□□□□□ -0.7
TRAPPC1-206ENST00000573989 IGHV3OR15-7A0A075B7D8 119 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 PPIAL4CA0A0B4J2A2 164 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 IGKV1-9A0A0C4DH69 117 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 TRBV5-5A0A0J9YX44 114 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 OR2AT4A6NND4 320 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 A8MXK9 166 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 TRAPPC2LH3BP13 241 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 POU3F4P49335 361 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 LCN2P80188 198 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 MLLT11Q13015 90 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 TRAM1Q15629 374 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 ATPAF1Q5TC12 328 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 CD276Q5ZPR3 534 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 ACP7Q6ZNF0 438 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 SLC25A26Q70HW3 274 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 ZNF367Q7RTV3 350 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 CEP19Q96LK0 163 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 GPER1Q99527 375 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 SHARPINQ9H0F6 387 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 WDR13Q9H1Z4 485 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 CDC42EP3Q9UKI2 254 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 POLR3KQ9Y2Y1 108 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 LRRC42Q9Y546 428 aa10.66□□□□□ -0.7
TRAPPC1-206ENST00000573989 IGKV1-27A0A075B6S5 117 aa10.65□□□□□ -0.7
TRAPPC1-206ENST00000573989 ZNF879B4DU55 563 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms