RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 FIP1L1Q6UN15 594 aaKnown RBP10.21□□□□□ -0.77
SF3B3-208ENST00000567250 C11orf53Q8IXP5 236 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 MKXQ8IYA7 352 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 Q8IYB0 196 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 SPARTQ8N0X7 666 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 POC1AQ8NBT0 407 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 OR8B3Q8NGG8 313 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 OR13C5Q8NGS8 318 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 TMIGD2Q96BF3 282 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 OR8B2Q96RD0 313 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 TMED9Q9BVK6 235 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 PATZ1Q9HBE1 687 aaKnown RBP10.21□□□□□ -0.77
SF3B3-208ENST00000567250 TMEM138Q9NPI0 162 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 RASL12Q9NYN1 266 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 TAS2R4Q9NYW5 299 aa10.21□□□□□ -0.77
SF3B3-208ENST00000567250 IGKV1-9A0A0C4DH69 117 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 NKX6-3A6NJ46 265 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 CEACAM18A8MTB9 384 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 B4DSR2 109 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 AKR7A2O43488 359 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 NOS1APO75052 506 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-208ENST00000567250 PGA5P0DJD9 388 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 IGHV4-31P0DP07 118 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 EGR1P18146 543 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 PCMT1P22061 227 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 GABRA5P31644 462 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 POU3F4P49335 361 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 RPS11P62280 158 aaKnown RBP eCLIP10.2□□□□□ -0.78
SF3B3-208ENST00000567250 DOC2BQ14184 412 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 ESCO2Q56NI9 601 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 UBE2UQ5VVX9 321 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 CYB5R2Q6BCY4 276 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF529Q6P280 563 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.2□□□□□ -0.782e-7■■■■□ 19.8
SF3B3-208ENST00000567250 CLEC9AQ6UXN8 241 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 FAM90A1Q86YD7 464 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 CALHM1Q8IU99 346 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 NKAIN3Q8N8D7 197 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 LINC01356Q8N9X3 169 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 PNLDC1Q8NA58 520 aaKnown RBP10.2□□□□□ -0.78
SF3B3-208ENST00000567250 OR51F2Q8NH61 342 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 NEIL1Q96FI4 390 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-208ENST00000567250 DERL3Q96Q80 235 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 GPER1Q99527 375 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 TMEM246Q9BRR3 403 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 ABCA2Q9BZC7 2435 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 DNTTIP1Q9H147 329 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 METTL17Q9H7H0 456 aaPredicted RBP10.2□□□□□ -0.78
SF3B3-208ENST00000567250 FOXJ3Q9UPW0 622 aa10.2□□□□□ -0.78
SF3B3-208ENST00000567250 A0A087WXM4 84 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 TRAPPC2LH3BP13 241 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 CCRL2O00421 344 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 WNT9BO14905 357 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 CD5LO43866 347 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 FOXH1O75593 365 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 GPX5O75715 221 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 RHBDL1O75783 438 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ARL6IP5O75915 188 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 RGS9O75916 674 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-208ENST00000567250 NXPH2O95156 264 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF205O95201 554 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 PLATP00750 562 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ALDOBP05062 364 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ACAA1P09110 424 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ZNF16P17020 682 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-208ENST00000567250 PSMB9P28065 219 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 BDKRB2P30411 391 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 IL2RGP31785 369 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 NPY4RP50391 375 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 LMO4P61968 165 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 KISS1Q15726 138 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ARMCX4Q5H9R4 360 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 FAM201AQ5SY85 155 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 DDI2Q5TDH0 399 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 SFRP4Q6FHJ7 346 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-208ENST00000567250 FAM166AQ6J272 317 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 SLC25A26Q70HW3 274 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 SLC36A1Q7Z2H8 476 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 GLCCI1Q86VQ1 547 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 PHC2Q8IXK0 858 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 DEFB108BQ8NET1 73 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 PHYHIPQ92561 330 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 CEP19Q96LK0 163 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 SLITRK2Q9H156 845 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 RHOFQ9HBH0 211 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 TMEM165Q9HC07 324 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 SMURF1Q9HCE7 757 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 NDUFB11Q9NX14 153 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 NLKQ9UBE8 527 aa10.19□□□□□ -0.78
SF3B3-208ENST00000567250 ACANP16112 2415 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 IGKV1-27A0A075B6S5 117 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 TRBV5-7A0A0A0MS05 114 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 A8MXK9 166 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 F5H0A9 414 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-208ENST00000567250 ADAM20O43506 726 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 SYNGR1O43759 233 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 SC5DO75845 299 aa10.18□□□□□ -0.78
SF3B3-208ENST00000567250 MSMBP08118 114 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms