RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 SLC26A1Q9H2B4 701 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A0B4J2E0 115 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A1B0GX12 115 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 TOX3O15405 576 aaPredicted RBP12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 ADAM20O43506 726 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 IGHV3-13P01766 116 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 WDR38Q5JTN6 314 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 FNDC7Q5VTL7 733 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 ETFRF1Q6IPR1 90 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 GTF2H5Q6ZYL4 71 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 CALHM3Q86XJ0 350 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 COMMD1Q8N668 190 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 TM4SF19Q96DZ7 209 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 FAAP24Q9BTP7 215 aa12.15□□□□□ -0.46
CX3CL1-204ENST00000565912 DOCK2Q92608 1830 aa12.15□□□□□ -0.47
CX3CL1-204ENST00000565912 SSPNQ14714 243 aa12.15□□□□□ -0.47
CX3CL1-204ENST00000565912 IGFBP7Q16270 282 aa12.15□□□□□ -0.47
CX3CL1-204ENST00000565912 OR6S1Q8NH40 331 aa12.15□□□□□ -0.47
CX3CL1-204ENST00000565912 RPP25Q9BUL9 199 aaKnown RBP12.15□□□□□ -0.47
CX3CL1-204ENST00000565912 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 USF1P22415 310 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 PRRX1P54821 245 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 KLF3P57682 345 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 TPPP2P59282 170 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 OR2I1PQ8NGU4 316 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 DPF1Q92782 380 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 OR2A5Q96R48 311 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 PCED1AQ9H1Q7 454 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 ZFP64Q9NPA5 681 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 FPR2P25090 351 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 MMP15P51511 669 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 TRIP6Q15654 476 aaKnown RBP12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 TMEM211Q6ICI0 200 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 RHOFQ9HBH0 211 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 ZBTB44Q8NCP5 570 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 DOK5Q9P104 306 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 TRAPPC1Q9Y5R8 145 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 SCO1O75880 301 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 FGF2P09038 288 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 TUSC1Q2TAM9 212 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 BTNL3Q6UXE8 466 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 MOB1BQ7L9L4 216 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 SEBOXQ9HB31 216 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
CX3CL1-204ENST00000565912 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 NKX2-2O95096 273 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PTHLHP12272 177 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 CTGFP29279 349 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PPP1CAP62136 330 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 RNASEKQ6P5S7 137 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 C16orf47Q6ZP98 133 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 TCTE3Q8IZS6 198 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 KLHDC1Q8N7A1 406 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 C20orf141Q9NUB4 165 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 DHRS3O75911 302 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 OR4A8P0C604 315 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PRRX2Q99811 253 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 RAB1BQ9H0U4 201 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 ARAP2Q8WZ64 1704 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 HYAL3O43820 417 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 SBK3P0C264 359 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 TMIGD3P0DMS9 266 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 RAB7AP51149 207 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 HNRNPA3P51991 378 aaKnown RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 ZNF793Q6ZN11 406 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 OR2D2Q9H210 308 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 SIGLEC7Q9Y286 467 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 CTSVO60911 334 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PATE4P0C8F1 98 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PTGFRP43088 359 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 C11orf87Q6NUJ2 197 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PRSS41Q7RTY9 318 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 ZNF680Q8NEM1 530 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 OR1A1Q9P1Q5 309 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 PAPPA2Q9BXP8 1791 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 hADV38S2A0JD32 116 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 ANKRD34CP0C6C1 535 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 GALNSP34059 522 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 C6orf201Q7Z4U5 140 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 C1orf210Q8IVY1 113 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 SFTPA1Q8IWL2 248 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 ZMIZ1Q9ULJ6 1067 aa12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 AMMECR1Q9Y4X0 333 aaPredicted RBP12.13□□□□□ -0.47
CX3CL1-204ENST00000565912 TMEM272A0A1B0GTI8 110 aa12.12□□□□□ -0.47
CX3CL1-204ENST00000565912 MS4A18H0YCH9 400 aa12.12□□□□□ -0.47
CX3CL1-204ENST00000565912 MS4A18Q3C1V0 323 aa12.12□□□□□ -0.47
CX3CL1-204ENST00000565912 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms