RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 LMX1BO60663 402 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 MSMBP08118 114 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 WNT2P09544 360 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 RPS2P15880 293 aaKnown RBP13.97□□□□□ -0.17
RNF40-206ENST00000564260 MTCP1P56278 107 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 RPS11P62280 158 aaKnown RBP eCLIP13.97□□□□□ -0.17
RNF40-206ENST00000564260 SMIM21Q3B7S5 101 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 ESCO2Q56NI9 601 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 ZNF826PQ6ZT77 177 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 SLC36A1Q7Z2H8 476 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 CDH26Q8IXH8 852 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 MKXQ8IYA7 352 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
RNF40-206ENST00000564260 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 OR8B3Q8NGG8 313 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 MSI2Q96DH6 328 aaKnown RBP13.97□□□□□ -0.17
RNF40-206ENST00000564260 DMRTB1Q96MA1 342 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 OR5M11Q96RB7 305 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 OR8B2Q96RD0 313 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 NRIP2Q9BQI9 281 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 TMEM138Q9NPI0 162 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 ACOT13Q9NPJ3 140 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 FOXJ3Q9UPW0 622 aa13.97□□□□□ -0.17
RNF40-206ENST00000564260 FAM230AA0A1W2PPH8 454 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 A6NIN4 97 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 ZNF879B4DU55 563 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.96□□□□□ -0.17
RNF40-206ENST00000564260 TNFRSF13BO14836 293 aaPredicted RBP13.96□□□□□ -0.17
RNF40-206ENST00000564260 WNT9BO14905 357 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 LY6G6DO95868 133 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 CPEP16870 476 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 GLRA1P23415 457 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 BMXP51813 675 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 ZNF773Q6PK81 442 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 GLCCI1Q86VQ1 547 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 OR13C9Q8NGT0 318 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 SGCDQ92629 289 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 TMIGD2Q96BF3 282 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 MGLLQ99685 303 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 HES4Q9HCC6 221 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 DNAJB11Q9UBS4 358 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 KCNS2Q9ULS6 477 aa13.96□□□□□ -0.17
RNF40-206ENST00000564260 TRBV5-7A0A0A0MS05 114 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 A8MV72 311 aaPredicted RBP13.95□□□□□ -0.18
RNF40-206ENST00000564260 C3orf80F5H4A9 247 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 H3BSH0 61 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 J3QLI3 93 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 TNFAIP8O95379 198 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 IL2RGP31785 369 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 ERVK11-1P61568 191 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 DOC2BQ14184 412 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 UBE2UQ5VVX9 321 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 STUMQ69YW2 141 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 FIP1L1Q6UN15 594 aaKnown RBP13.95□□□□□ -0.18
RNF40-206ENST00000564260 MED30Q96HR3 178 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 NARFLQ9H6Q4 476 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 NLKQ9UBE8 527 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 LPAR3Q9UBY5 353 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 MED13LQ71F56 2210 aa13.95□□□□□ -0.18
RNF40-206ENST00000564260 MEGF11A6BM72 1044 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 NKX6-3A6NJ46 265 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 AKR7A2O43488 359 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 RHBDL1O75783 438 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 SC5DO75845 299 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 ECDO95905 644 aaPredicted RBP13.94□□□□□ -0.18
RNF40-206ENST00000564260 TGFAP01135 160 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 HCKP08631 526 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 CR1P17927 2039 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 IGFBP3P17936 291 aaPredicted RBP13.94□□□□□ -0.18
RNF40-206ENST00000564260 GALP22466 123 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 GABRA5P31644 462 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 RANBP1P43487 201 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 SOX2P48431 317 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 PITPNBP48739 271 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 EMX1Q04741 257 aaPredicted RBP13.94□□□□□ -0.18
RNF40-206ENST00000564260 PDZK1IP1Q13113 114 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 KISS1Q15726 138 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 CD276Q5ZPR3 534 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 UNQ9370/PRO34162Q6UXP9 181 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 CALHM1Q8IU99 346 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 SPARTQ8N0X7 666 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 NKAIN3Q8N8D7 197 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 ZFP41Q8N8Y5 198 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 PXT1Q8NFP0 134 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 ANGPTL6Q8NI99 470 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 TRMT10AQ8TBZ6 339 aaKnown RBP13.94□□□□□ -0.18
RNF40-206ENST00000564260 TMEM186Q96B77 213 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 CEP19Q96LK0 163 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 DERL3Q96Q80 235 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 SSBP3Q9BWW4 388 aaPredicted RBP13.94□□□□□ -0.18
RNF40-206ENST00000564260 METTL17Q9H7H0 456 aaPredicted RBP13.94□□□□□ -0.18
RNF40-206ENST00000564260 CLN8Q9UBY8 286 aa13.94□□□□□ -0.18
RNF40-206ENST00000564260 MTORP42345 2549 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 IGKV1-27A0A075B6S5 117 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 OR2AT4A6NND4 320 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 FAM157AC9JC47 383 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 NXPH2O95156 264 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 KNG1P01042 644 aa13.93□□□□□ -0.18
RNF40-206ENST00000564260 ZNF16P17020 682 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms