RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CANT1Q8WVQ1 401 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF488Q96MN9 340 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 PAPOLGQ9BWT3 736 aaKnown RBP8.25□□□□□ -1.09
SF3B3-204ENST00000563739 YY1AP1Q9H869 796 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 S100A14Q9HCY8 104 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 KRCC1Q9NPI7 259 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-204ENST00000563739 N6AMT1Q9Y5N5 214 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 TSSC4Q9Y5U2 329 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-204ENST00000563739 LYVE1Q9Y5Y7 322 aa8.25□□□□□ -1.09
SF3B3-204ENST00000563739 MEX3AA1L020 520 aaKnown RBP8.24□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF850A8MQ14 1090 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF878C9JN71 531 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 E9PQ18 207 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 TBX1O43435 398 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 DUS4LO95620 317 aaKnown RBP8.24□□□□□ -1.09
SF3B3-204ENST00000563739 CST4P01036 141 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 HLA-DQA2P01906 255 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 GYPBP06028 91 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 SLC6A6P31641 620 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 ENTPD1P49961 510 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF121P58317 390 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-204ENST00000563739 TEX30Q5JUR7 227 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 OR2T5Q6IEZ7 315 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 RRM2BQ7LG56 351 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 EGFL6Q8IUX8 553 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 SLC37A3Q8NCC5 494 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 OR11H6Q8NGC7 330 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 OR4M1Q8NGD0 313 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 OR4C15Q8NGM1 316 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 OR2T29Q8NH02 315 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 MUC7Q8TAX7 377 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 RPS4Y2Q8TD47 263 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 P2RX4Q99571 388 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 CHID1Q9BWS9 393 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 NDEL1Q9GZM8 345 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 OR51I2Q9H344 312 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 EGLN3Q9H6Z9 239 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 VNN3Q9NY84 501 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 TBL2Q9Y4P3 447 aaKnown RBP8.24□□□□□ -1.09
SF3B3-204ENST00000563739 LRP12Q9Y561 859 aa8.24□□□□□ -1.09
SF3B3-204ENST00000563739 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 TCRBV4S1A1TA0A5B7 111 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 TMEM210A6NLX4 147 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 TNFRSF11BO00300 401 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 SPARCP09486 303 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 NHLRC4P0CG21 123 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF823P16415 610 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 OPRL1P41146 370 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 GABRA2P47869 451 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 THBS3P49746 956 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 HMGA2P52926 109 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 RPL31P62899 125 aaKnown RBP8.23□□□□□ -1.09
SF3B3-204ENST00000563739 BLMHQ13867 455 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 SSX2Q16385 188 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 ACP7Q6ZNF0 438 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 FAM57BQ71RH2 274 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 THAP5Q7Z6K1 395 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 RNF133Q8WVZ7 376 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 AQP3Q92482 292 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 FOXRED1Q96CU9 486 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-204ENST00000563739 OR8B4Q96RC9 309 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 PRR25Q96S07 402 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 ASCL2Q99929 193 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 MICU1Q9BPX6 476 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 IFT27Q9BW83 186 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 RTL8AQ9BWD3 113 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 HEXA-AS1Q9H8Q6 139 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 REEP1Q9H902 201 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 CENPMQ9NSP4 180 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 USE1Q9NZ43 259 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 DNAJC27Q9NZQ0 273 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 SAMHD1Q9Y3Z3 626 aaKnown RBP8.23□□□□□ -1.09
SF3B3-204ENST00000563739 LRRC42Q9Y546 428 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 MPC1Q9Y5U8 109 aa8.23□□□□□ -1.09
SF3B3-204ENST00000563739 CST1P01037 141 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 ANXA2P07355 339 aaKnown RBP8.22□□□□□ -1.09
SF3B3-204ENST00000563739 GLRA1P23415 457 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 CD24P25063 80 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 POU1F1P28069 291 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 IFNGR2P38484 337 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 VHLP40337 213 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 GPM6AP51674 278 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 IL5RAQ01344 420 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 PPP1R8Q12972 351 aaKnown RBP8.22□□□□□ -1.09
SF3B3-204ENST00000563739 CRMP1Q14194 572 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 GK3PQ14409 553 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 TIGD6Q17RP2 521 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 GFOD2Q3B7J2 385 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 ZNF770Q6IQ21 691 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-204ENST00000563739 BAIAP2L2Q6UXY1 529 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 KRT77Q7Z794 578 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 CSNK2A3Q8NEV1 391 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 PROKR2Q8NFJ6 384 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 OR9Q2Q8NGE9 314 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 OR4Q3Q8NH05 313 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 NRG4Q8WWG1 115 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 MALSU1Q96EH3 234 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 ABHD6Q9BV23 337 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 U3KQV3 271 aa8.22□□□□□ -1.09
SF3B3-204ENST00000563739 RFPL4AA6NLU0 287 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms