RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ADIGQ0VDE8 80 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 PMS2P3Q13401 168 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 EIF4EBP2Q13542 120 aaPredicted RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 SLC25A35Q3KQZ1 300 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 LINC00483Q53H64 154 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ACTBL2Q562R1 376 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 RNASE13Q5GAN3 156 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TTC32Q5I0X7 151 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF470Q6ECI4 717 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ZFP1Q6P2D0 407 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 OR2AE1Q8NHA4 323 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 NT5CQ8TCD5 201 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 CCDC12Q8WUD4 166 aaPredicted RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TMEM239Q8WW34 195 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 IFT81Q8WYA0 676 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 HGDQ93099 445 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 S100PBPQ96BU1 408 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 L3HYPDHQ96EM0 354 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 SPACA5Q96QH8 159 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 METTL26Q96S19 204 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 VAT1Q99536 393 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 PDCD1LG2Q9BQ51 273 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ACBD6Q9BR61 282 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 RSG1Q9BU20 258 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 EMC6Q9BV81 110 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TMED9Q9BVK6 235 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 SFXN3Q9BWM7 321 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 API5Q9BZZ5 524 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TOLLIPQ9H0E2 274 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 CENPHQ9H3R5 247 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 OR2S2Q9NQN1 319 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TREX1Q9NSU2 369 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 VAPAQ9P0L0 249 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 CYB5R1Q9UHQ9 305 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 KLK12Q9UKR0 248 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 AP3M1Q9Y2T2 418 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 YTHDF2Q9Y5A9 579 aaKnown RBP2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 TMEM14AQ9Y6G1 99 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 DCAF1Q9Y4B6 1507 aa2.01□□□□□ -2.09
SHCBP1-202ENST00000563219 ANKRD12Q6UB98 2062 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 LOC102724200A0A096LPH7 203 aaPredicted RBP2□□□□□ -2.09
SHCBP1-202ENST00000563219 IGKV6-21A0A0C4DH24 114 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 SOCS1O15524 211 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 NIPSNAP2O75323 286 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 MED6O75586 246 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 ZMPSTE24O75844 475 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 CCNKO75909 580 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 IGLV2-8P01709 118 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 IGHV3-11P01762 117 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 RLN2P04090 185 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 IGKV5-2P06315 115 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 MMP7P09237 267 aaPredicted RBP2□□□□□ -2.09
SHCBP1-202ENST00000563219 CD28P10747 220 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 NPY1RP25929 384 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 P2RY2P41231 377 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 DNASE1L1P49184 302 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 PSMB2P49721 201 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 AQP5P55064 265 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 RPL10AP62906 217 aaKnown RBP2□□□□□ -2.09
SHCBP1-202ENST00000563219 PITPNAQ00169 270 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 TPBGQ13641 420 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 PIGHQ14442 188 aaPredicted RBP2□□□□□ -2.09
SHCBP1-202ENST00000563219 SNCBQ16143 134 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 PSG3Q16557 428 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 ZNF691Q5VV52 312 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 FAM19A1Q7Z5A9 133 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 PRNTQ86SH4 94 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 PDPNQ86YL7 162 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 CD302Q8IX05 232 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 BOD1L2Q8IYS8 172 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 DNAAF3Q8N9W5 541 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 OR5T1Q8NG75 326 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 SFXN5Q8TD22 340 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 GTF2H4Q92759 462 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 NARS2Q96I59 477 aaKnown RBP2□□□□□ -2.09
SHCBP1-202ENST00000563219 ZFP3Q96NJ6 502 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 SERPINB11Q96P15 392 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 TBL1YQ9BQ87 522 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 MED10Q9BTT4 135 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 C21orf62Q9NYP8 219 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 TAS2R5Q9NYW4 299 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 CD300AQ9UGN4 299 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 ANXA10Q9UJ72 324 aa2□□□□□ -2.09
SHCBP1-202ENST00000563219 BAZ2AQ9UIF9 1905 aaKnown RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 DOCK9Q9BZ29 2069 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 IGHV3-49A0A0A0MS15 119 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 IGHV6-1A0A0B4J1U7 121 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 CCL15-CCL14A0A0B4J2E2 113 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 GOLGA6L4A6NEF3 574 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 RBFOX3A6NFN3 312 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 IQCF5A8MTL0 148 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 M0QXV9 152 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 BPY2O14599 106 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 PSPHP1O15172 72 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ZW10O43264 779 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 SHOX2O60902 331 aaPredicted RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 GATBO75879 557 aaKnown RBP1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 ATP5HO75947 161 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 KLHL2O95198 593 aa1.99□□□□□ -2.09
SHCBP1-202ENST00000563219 BRI3O95415 125 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms