RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 LRRC29Q8WV35 223 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 PP6455Q8WZ26 134 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 RPL3LQ92901 407 aaKnown RBP5.17□□□□□ -1.58
CNOT1-204ENST00000563130 ADAT3Q96EY9 351 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-204ENST00000563130 HIST1H2AAQ96QV6 131 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 PDCD1LG2Q9BQ51 273 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 CDCA4Q9BXL8 241 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 DUSP21Q9H596 190 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 METTL17Q9H7H0 456 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-204ENST00000563130 YAE1D1Q9NRH1 226 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 GPR173Q9NS66 373 aa5.17□□□□□ -1.58
CNOT1-204ENST00000563130 PAK1IP1Q9NWT1 392 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-204ENST00000563130 SIRT4Q9Y6E7 314 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-204ENST00000563130 IGKV1-9A0A0C4DH69 117 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 TRBV2A0A0J9YWF9 115 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 OOEPA6NGQ2 149 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 KIAA1324LA8MWY0 1029 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 H3BSH0 61 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PLPP2O43688 288 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 RHBDL1O75783 438 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CDK1P06493 297 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 MUC1P15941 1255 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ZFP36P26651 326 aaKnown RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 SEC61A1P61619 476 aaKnown RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 MED21Q13503 144 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PLCXD3Q63HM9 321 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 DMKNQ6E0U4 476 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 SFRP4Q6FHJ7 346 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ZNF841Q6ZN19 808 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 UTS2BQ765I0 119 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 FAM90A1Q86YD7 464 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PARP16Q8N5Y8 322 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ZNF676Q8N7Q3 588 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 NANOGP1Q8N7R0 232 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 C19orf18Q8NEA5 215 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 OR51F2Q8NH61 342 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 OR5AK2Q8NH90 309 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 GATAD2BQ8WXI9 593 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 AQP3Q92482 292 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 RGP1Q92546 391 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 SGCDQ92629 289 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 TMEM186Q96B77 213 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 C12orf43Q96C57 262 aaKnown RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 TECTBQ96PL2 329 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PLEKHA1Q9HB21 404 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 UBAP1Q9NZ09 502 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 KAAG1Q9UBP8 84 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 MIOXQ9UGB7 285 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PCDHGB5Q9Y5G0 923 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 IGKV1-27A0A075B6S5 117 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 TRAV38-1A0A0B4J264 116 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 TRAV20A0A0B4J274 112 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 hCG_1807616A0A1W2PRN6 198 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 NDUFA2O43678 99 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 NOS1APO75052 506 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CRLF1O75462 422 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 GATBO75879 557 aaKnown RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ACAA1P09110 424 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PF4V1P10720 104 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 AMY2BP19961 511 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CRHBPP24387 322 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CD80P33681 288 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PAX2Q02962 417 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 IRF3Q14653 427 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ATPAF1Q5TC12 328 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ASPHD2Q6ICH7 369 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ZNF529Q6P280 563 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 HAGHLQ6PII5 290 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CRIP3Q6Q6R5 217 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 LYPD2Q6UXB3 125 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 KCTD8Q6ZWB6 473 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ZNF573Q86YE8 665 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CALHM1Q8IU99 346 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 STX19Q8N4C7 294 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 DNAAF1Q8NEP3 725 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 FGGYQ96C11 551 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 SMIM19Q96E16 107 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PGLYRP3Q96LB9 341 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ZNF184Q99676 751 aaPredicted RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CENPOQ9BU64 300 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 COMMD4Q9H0A8 199 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 WDR13Q9H1Z4 485 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 TRIM36Q9NQ86 728 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 HIF1ANQ9NWT6 349 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CHCHD3Q9NX63 227 aaKnown RBP5.16□□□□□ -1.58
CNOT1-204ENST00000563130 ERVK-18Q9QC07 812 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 CTSZQ9UBR2 303 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 KCNS2Q9ULS6 477 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 PCDHB10Q9UN67 800 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 LRCH1Q9Y2L9 728 aa5.16□□□□□ -1.58
CNOT1-204ENST00000563130 SETD2Q9BYW2 2564 aaPredicted RBP5.15□□□□□ -1.58
CNOT1-204ENST00000563130 PTGES3LE9PB15 166 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 J3QT63 122 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 AKR7A2O43488 359 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 DENRO43583 198 aaKnown RBP5.15□□□□□ -1.58
CNOT1-204ENST00000563130 FOXH1O75593 365 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 FCN3O75636 299 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 SERPINA3P01011 423 aa5.15□□□□□ -1.58
CNOT1-204ENST00000563130 MT-ND2P03891 347 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms