RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 C2orf54Q08AI8 447 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF141Q15928 474 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 MRPL2Q5T653 305 aaKnown RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 SMARCD3Q6STE5 483 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 FA2HQ7L5A8 372 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 DAW1Q8N136 415 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 ZCCHC24Q8N2G6 241 aaKnown RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 ZFP62Q8NB50 900 aaPredicted RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 OR2M7Q8NG81 312 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 OR52K2Q8NGK3 314 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 OR8K3Q8NH51 312 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 CMTM2Q8TAZ6 248 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 ACTL9Q8TC94 416 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 ORAOV1Q8WV07 137 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 DERL3Q96Q80 235 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 PEBP4Q96S96 227 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 C8orf33Q9H7E9 229 aaPredicted RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 MCTS1Q9ULC4 181 aaKnown RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 ICE1Q9Y2F5 2266 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 C9JQL5 133 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 J3QRE1 110 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 SMC2O95347 1197 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 OR4Q2P0C623 313 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 SEC11BP0C7V7 166 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 SLC6A1P30531 599 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 TGFBR2P37173 567 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 TUFMP49411 452 aaKnown RBP1.31□□□□□ -2.2
DENND4A-205ENST00000562540 NUDT2P50583 147 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 GZMMP51124 257 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 LCN2P80188 198 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 PMVKQ15126 192 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 LDLRAD2Q5SZI1 272 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 LINC00336Q6ZUF6 198 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 OTUD6AQ7L8S5 288 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 TMEM144Q7Z5S9 345 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 TMCO2Q7Z6W1 182 aaPredicted RBP1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ITPRIPQ8IWB1 547 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ZDHHC22Q8N966 263 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 OR5H2Q8NGV7 314 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 PHOSPHO2Q8TCD6 241 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 RNF170Q96K19 258 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 MRPL20Q9BYC9 149 aaKnown RBP1.31□□□□□ -2.2
DENND4A-205ENST00000562540 BLZF1Q9H2G9 400 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ARMC7Q9H6L4 198 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 VSIRQ9H7M9 311 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 RDH14Q9HBH5 336 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 C6orf50Q9HD87 102 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 FAM60AQ9NP50 221 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ABCB9Q9NP78 766 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 CHRAC1Q9NRG0 131 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 KLF12Q9Y4X4 402 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 CACNA1GO43497 2377 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ELP1O95163 1332 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ITGB4P16144 1822 aa1.31□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF608Q9ULD9 1512 aaPredicted RBP1.3□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF99A8MXY4 864 aaPredicted RBP1.3□□□□□ -2.2
DENND4A-205ENST00000562540 C15orf65H3BRN8 121 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 J3QT63 122 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 AKR7A2O43488 359 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 NDUFS5O43920 106 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 PTTG1O95997 202 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 TPM2P07951 284 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 STAG3L3P0CL85 134 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 RALBP11234 206 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 GNRHRP30968 328 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 HCCSP53701 268 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 CLDN8P56748 225 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 RPL10AP62906 217 aaKnown RBP1.3□□□□□ -2.2
DENND4A-205ENST00000562540 ST3GAL4Q11206 333 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 SLC9A3R2Q15599 337 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 LGALSLQ3ZCW2 172 aaPredicted RBP1.3□□□□□ -2.2
DENND4A-205ENST00000562540 CDNFQ49AH0 187 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 PDZD11Q5EBL8 140 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 PIP5KL1Q5T9C9 394 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 CPTPQ5TA50 214 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 LY6G5BQ8NDX9 201 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 FAM57AQ8TBR7 257 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 ITLN2Q8WWU7 325 aaPredicted RBP1.3□□□□□ -2.2
DENND4A-205ENST00000562540 PPP1R36Q96LQ0 422 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 IGF2BP2-AS1Q96M15 143 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 IL22Q9GZX6 179 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 DSN1Q9H410 356 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 PRSS16Q9NQE7 514 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 PARP11Q9NR21 331 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 RHBDD3Q9Y3P4 386 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 ORC6Q9Y5N6 252 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 MROH5Q6ZUA9 1318 aa1.3□□□□□ -2.2
DENND4A-205ENST00000562540 A0A1B0GTQ1 180 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 A0A1W2PRF3 423 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 A0A1W2PRM7 423 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 E7EQL1 145 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF701M0R085 212 aaPredicted RBP1.29□□□□□ -2.2
DENND4A-205ENST00000562540 RGS5O15539 181 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 AQP9O43315 295 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 ENTPD6O75354 484 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 OR2A4O95047 310 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 PRPS1L1P21108 318 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 CD9P21926 228 aa1.29□□□□□ -2.2
DENND4A-205ENST00000562540 PAX6P26367 422 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms