RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 SH3GL1Q99961 368 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 C1orf21Q9H246 121 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 HIPK2Q9H2X6 1198 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 EVA1AQ9H8M9 152 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 PSMC3IPQ9P2W1 217 aaPredicted RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 NLKQ9UBE8 527 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 RABL2BQ9UNT1 228 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 SH3GLB1Q9Y371 365 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 LRRC42Q9Y546 428 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 MINOS1-NBL1R4GNA1 71 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 HSPG2P98160 4391 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 VPS13DQ5THJ4 4388 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 TEX13CA0A0J9YWL9 993 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 A0A1B0GVG6 124 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 C12orf77C9JDV5 145 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 XKRYO14609 159 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 OVOL1O14753 267 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 SLC22A2O15244 555 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 PTP4A3O75365 173 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 MTRF1O75570 445 aaKnown RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 SERPINB7O75635 380 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 TIPRLO75663 272 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 LYPD3O95274 346 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 SPARCP09486 303 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 PIPP12273 146 aaPredicted RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 GYPEP15421 78 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 IL12AP29459 219 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 MDH1P40925 334 aaKnown RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 CENPAP49450 140 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 ARPC4P59998 168 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 CDK6Q00534 326 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 TRAP1Q12931 704 aaKnown RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 FADDQ13158 208 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 ZNF273Q14593 569 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 SMN1Q16637 294 aaKnown RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 PNLIPRP3Q17RR3 467 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 C6orf10Q5SRN2 563 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 GCNT6Q5T4J0 391 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 LGALS9CQ6DKI2 356 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 GPR139Q6DWJ6 353 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 CORO6Q6QEF8 472 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 LINC00336Q6ZUF6 198 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 STPG2Q8N412 459 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 OR6T1Q8NGN1 323 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 C4orf3Q8WVX3 66 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 GIMAP1Q8WWP7 306 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 DCUN1D4Q92564 292 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 NABP2Q9BQ15 211 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 ZNF426Q9BUY5 554 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 TMED9Q9BVK6 235 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 VCXQ9H320 206 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 GHITMQ9H3K2 345 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 TBC1D23Q9NUY8 699 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.1□□□□□ -1.75
HERC1-213ENST00000561359 KLK5Q9Y337 293 aaPredicted RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 MOB4Q9Y3A3 225 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 N6AMT1Q9Y5N5 214 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 HSPE1-MOB4S4R3N1 261 aa4.1□□□□□ -1.75
HERC1-213ENST00000561359 DYNC1H1Q14204 4646 aaKnown RBP4.1□□□□□ -1.75
HERC1-213ENST00000561359 DNAH11Q96DT5 4516 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 A0A1B0GVY2 172 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 MEX3AA1L020 520 aaKnown RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 PRSS37A4D1T9 235 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 C17orf98A8MV24 154 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 CLIC1O00299 241 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 SLC16A7O60669 478 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 KHDRBS3O75525 346 aaKnown RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 OR5F1O95221 314 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 TSPAN19P0C672 248 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ZCCHC18P0CG32 403 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 PSG2P11465 335 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 LBPP18428 481 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 GLRA1P23415 457 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 HTR1DP28221 377 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 TPTEP56180 551 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ACTA2P62736 377 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ACTG2P63267 376 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ACTC1P68032 377 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ACTA1P68133 377 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ZNF616Q08AN1 781 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 GPR50Q13585 617 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 RCN1Q15293 331 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 RBMY1FQ15415 496 aaKnown RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 MEP1BQ16820 701 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 SNAI3Q3KNW1 292 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 GLYATL3Q5SZD4 288 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 LCN8Q6JVE9 175 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 NANOGP8Q6NSW7 305 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 CEMP1Q6PRD7 247 aaPredicted RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 TSEN54Q7Z6J9 526 aaKnown RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 SLC35E3Q7Z769 313 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 ZNF554Q86TJ5 538 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 CALHM1Q8IU99 346 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 RBM45Q8IUH3 476 aaKnown RBP4.09□□□□□ -1.75
HERC1-213ENST00000561359 FOXRED2Q8IWF2 684 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 MICU2Q8IYU8 434 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 FAM71E2Q8N5Q1 922 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 CYB561A3Q8NBI2 242 aa4.09□□□□□ -1.75
HERC1-213ENST00000561359 OR1N2Q8NGR9 330 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms