RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 LCN2P80188 198 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 IRF3Q14653 427 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 ESCO2Q56NI9 601 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 ASPHD2Q6ICH7 369 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 PARP16Q8N5Y8 322 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 POC1AQ8NBT0 407 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 DNAAF1Q8NEP3 725 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 OR8B3Q8NGG8 313 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 C12orf43Q96C57 262 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 OR8B2Q96RD0 313 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 SSBP3Q9BWW4 388 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 CDCA4Q9BXL8 241 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 PKIBQ9C010 78 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 KAAG1Q9UBP8 84 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 LSM2Q9Y333 95 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-219ENST00000560871 FAM230AA0A1W2PPH8 454 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 RNF212BA8MTL3 300 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 PTGES3LE9PB15 166 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 PHF1O43189 567 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 NDUFA2O43678 99 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 NOS1APO75052 506 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 SERPINA3P01011 423 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 MT-ND2P03891 347 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 ATF1P18846 271 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 AZGP1P25311 298 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 PITPNBP48739 271 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 TAS2R43P59537 309 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 PAX2Q02962 417 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 MICBQ29980 383 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 CRIP3Q6Q6R5 217 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 NLRC3Q7RTR2 1065 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 ZFP41Q8N8Y5 198 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 GPR148Q8TDV2 347 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 TSEN15Q8WW01 171 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 TMEM158Q8WZ71 300 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 MYDGFQ969H8 173 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 SPSB1Q96BD6 273 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 BORCS8Q96FH0 119 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 DHDHQ9UQ10 334 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 TPRKBQ9Y3C4 175 aa12.9□□□□□ -0.34
RABGGTA-219ENST00000560871 A0A1B0GW55 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 TRAPPC2LH3BP13 241 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ADAM20O43506 726 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 RRP9O43818 475 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 PCMT1P22061 227 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 GLRA1P23415 457 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 GMFBP60983 142 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 RPS11P62280 158 aaKnown RBP eCLIP12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 GNB2P62879 340 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 BDH1Q02338 343 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 IL24Q13007 206 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 WDR25Q64LD2 544 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 OR13C5Q8NGS8 318 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 OR13C9Q8NGT0 318 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ZNF671Q8TAW3 534 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 GHSRQ92847 366 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ZNF488Q96MN9 340 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 OPALINQ96PE5 141 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 NRIP2Q9BQI9 281 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 MND1Q9BWT6 205 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 TMPRSS13Q9BYE2 586 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ZCCHC4Q9H5U6 513 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 MMP26Q9NRE1 261 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 NLKQ9UBE8 527 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 CLN8Q9UBY8 286 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ZNF222Q9UK12 451 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ERGIC3Q9Y282 383 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 POLDIP2Q9Y2S7 368 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 ZNF281Q9Y2X9 895 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 MXRA5Q9NR99 2828 aa12.89□□□□□ -0.35
RABGGTA-219ENST00000560871 A0A0G2JMP0 313 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 TRBV5-5A0A0J9YX44 114 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 A0A0X1KG70 313 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 ALX3O95076 343 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 ACAA1P09110 424 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 GATA3P23771 443 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 SOX2P48431 317 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 RBP2P50120 134 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 NPY4RP50391 375 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 YIF1BQ5BJH7 314 aa12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 RBM48Q5RL73 367 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-219ENST00000560871 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms