RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 NRMQ8IXM6 262 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 CMTM4Q8IZR5 234 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 Q8N2B8 174 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 TCEANCQ8N8B7 351 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 PLPP7Q8NBV4 271 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 PIFOQ8TCI5 191 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 FAM46AQ96IP4 442 aaKnown RBP8.04□□□□□ -1.12
TPM1-225ENST00000560679 NPFFR1Q9GZQ6 430 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 RERGLQ9H628 205 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 KRCC1Q9NPI7 259 aaPredicted RBP8.04□□□□□ -1.12
TPM1-225ENST00000560679 PNRC2Q9NPJ4 139 aaKnown RBP8.04□□□□□ -1.12
TPM1-225ENST00000560679 VSX1Q9NZR4 365 aaPredicted RBP8.04□□□□□ -1.12
TPM1-225ENST00000560679 GRHPRQ9UBQ7 328 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 POLR1DQ9Y2S0 133 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 RPL36Q9Y3U8 105 aaKnown RBP8.04□□□□□ -1.12
TPM1-225ENST00000560679 CDH10Q9Y6N8 788 aa8.04□□□□□ -1.12
TPM1-225ENST00000560679 CSMD3Q7Z407 3707 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 hCG_1807616A0A1W2PRN6 198 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 IRGMA1A4Y4 181 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 A6NLC8 198 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 EFCAB9A8MZ26 197 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 XKRYO14609 159 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 PRKYO43930 277 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 GMDSO60547 372 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 KHDRBS3O75525 346 aaKnown RBP8.03□□□□□ -1.12
TPM1-225ENST00000560679 GRPP07492 148 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 DBTP11182 482 aaKnown RBP8.03□□□□□ -1.12
TPM1-225ENST00000560679 RPL4P36578 427 aaKnown RBP8.03□□□□□ -1.12
TPM1-225ENST00000560679 GPR4P46093 362 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 ZNF92Q03936 586 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 EGFEM1PQ0D2K5 195 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 IKZF1Q13422 519 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 SNAI3Q3KNW1 292 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 RNLSQ5VYX0 342 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 PGAP1Q75T13 922 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 CROCCP3Q8IVE0 287 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 C11orf53Q8IXP5 236 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 GJC3Q8NFK1 279 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 OR51G2Q8NGK0 314 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 OR8D4Q8NGM9 314 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 NDNFQ8TB73 568 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 TMEM163Q8TC26 289 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 SPRYD4Q8WW59 207 aaPredicted RBP8.03□□□□□ -1.12
TPM1-225ENST00000560679 DMRTB1Q96MA1 342 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 TSSK2Q96PF2 358 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 OCSTAMPQ9BR26 566 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 TSSK6Q9BXA6 273 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 WNT10AQ9GZT5 417 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 SLC22A4Q9H015 551 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 NUAK2Q9H093 628 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 RAB18Q9NP72 206 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 TBC1D23Q9NUY8 699 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 TVP23BQ9NYZ1 205 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 TMEM5Q9Y2B1 443 aa8.03□□□□□ -1.12
TPM1-225ENST00000560679 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 IGLV1-36A0A0B4J1U3 117 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 HTR3EA5X5Y0 456 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 UNC119BA6NIH7 251 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 F5H5K5 113 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 M0R1W7 72 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 TFF1P04155 84 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 LCATP04180 440 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 HOXD3P31249 432 aaPredicted RBP8.02□□□□□ -1.13
TPM1-225ENST00000560679 SERPINB10P48595 397 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 ENTPD1P49961 510 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 PRKCDQ05655 676 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.02□□□□□ -1.13
TPM1-225ENST00000560679 MALLQ13021 153 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 SNAPC1Q16533 368 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 AANATQ16613 207 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 DGUOKQ16854 277 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 TMEM95Q3KNT9 176 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 ANKDD1AQ495B1 522 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 NCR3LG1Q68D85 454 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 STUMQ69YW2 141 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 SLC18B1Q6NT16 456 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 LINC00299Q6ZSB3 139 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 MRPL21Q7Z2W9 205 aaKnown RBP8.02□□□□□ -1.13
TPM1-225ENST00000560679 RNF113BQ8IZP6 322 aaKnown RBP8.02□□□□□ -1.13
TPM1-225ENST00000560679 OR2AE1Q8NHA4 323 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 DYNC2LI1Q8TCX1 351 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 LRRC29Q8WV35 223 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 RPL3LQ92901 407 aaKnown RBP8.02□□□□□ -1.13
TPM1-225ENST00000560679 BORCS5Q969J3 196 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 TMEM80Q96HE8 168 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 NKX3-1Q99801 234 aaPredicted RBP8.02□□□□□ -1.13
TPM1-225ENST00000560679 TEX12Q9BXU0 123 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 KRTAP17-1Q9BYP8 105 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 MEGF9Q9H1U4 602 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 EGLN3Q9H6Z9 239 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.02□□□□□ -1.13
TPM1-225ENST00000560679 NOP16Q9Y3C1 178 aaKnown RBP8.02□□□□□ -1.13
TPM1-225ENST00000560679 STARD9Q9P2P6 4700 aa8.02□□□□□ -1.13
TPM1-225ENST00000560679 A0A1W2PRX2 142 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 SNTNA6NMZ2 147 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 PRODHO43272 600 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 AIREO43918 545 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 HMGN1P05114 100 aa8.01□□□□□ -1.13
TPM1-225ENST00000560679 MUC1P15941 1255 aaPredicted RBP8.01□□□□□ -1.13
TPM1-225ENST00000560679 GADD45AP24522 165 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms