RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZNF676Q8N7Q3 588 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 OR10Z1Q8NGY1 313 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 OR5AK2Q8NH90 309 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CLDND2Q8NHS1 167 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 GAL3ST1Q99999 423 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 SOX7Q9BT81 388 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CHST5Q9GZS9 411 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 PPIL3Q9H2H8 161 aaKnown RBP11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CACNG2Q9Y698 323 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 CR1P17927 2039 aa11.77□□□□□ -0.52
PKNOX1-209ENST00000560448 PPIAL4EA0A075B759 164 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 TRBV2A0A0J9YWF9 115 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 A0A1B0GVG6 124 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 ANKRD61A6NGH8 418 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 B4DSR2 109 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 PPIAL4DF5H284 164 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 NDUFA2O43678 99 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 PPIAL4FP0DN26 164 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 FAHP16930 419 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 CD40LGP29965 261 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 KIR3DL2P43630 455 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 MTNR1BP49286 362 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 NANOS3P60323 173 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 CNN3Q15417 329 aaKnown RBP11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 SPRNQ5BIV9 151 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 UNQ9370/PRO34162Q6UXP9 181 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 UTS2BQ765I0 119 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 HPSE2Q8WWQ2 592 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 THRSPQ92748 146 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 PPP1R14AQ96A00 147 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 RNF170Q96K19 258 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 SLC7A11Q9UPY5 501 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.53
PKNOX1-209ENST00000560448 TRAV38-1A0A0B4J264 116 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ISPDA4D126 451 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ALX3O95076 343 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ZFPL1O95159 310 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 CD2P06729 351 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 GRPP07492 148 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 IGHV4-31P0DP07 118 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 S100A5P33763 92 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 PPP5CP53041 499 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF45Q02386 682 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 MPPED2Q15777 294 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ACSM3Q53FZ2 586 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 PRAMEF6Q5VXH4 476 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 DNAAF1Q8NEP3 725 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF671Q8TAW3 534 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF665Q9H7R5 613 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 C1orf123Q9NWV4 160 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 TMEM160Q9NX00 188 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 POLDIP2Q9Y2S7 368 aa11.76□□□□□ -0.53
PKNOX1-209ENST00000560448 hCG_1807616A0A1W2PRN6 198 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 LHBP01229 141 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 IGHV2-5P01817 119 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 MUC1P15941 1255 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF20P17024 532 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 TNFSF8P32971 234 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 FUT6P51993 359 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 CAV3P56539 151 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 IFITM3Q01628 133 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 C16orf87Q6PH81 154 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 NLRC3Q7RTR2 1065 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 NR2C2APQ86WQ0 139 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 OR13C5Q8NGS8 318 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 GPR148Q8TDV2 347 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 DVL3Q92997 716 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 CPNE2Q96FN4 548 aaPredicted RBP11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 MIXL1Q9H2W2 232 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 UFSP2Q9NUQ7 469 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 TREM2Q9NZC2 230 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 MIOXQ9UGB7 285 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 PCDHB10Q9UN67 800 aa11.75□□□□□ -0.53
PKNOX1-209ENST00000560448 MAP1AP78559 2803 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 ZNF732B4DXR9 585 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 LGALS8O00214 317 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 LY6G6DO95868 133 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 ACAA1P09110 424 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 UCHL1P09936 223 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 PRKACBP22694 351 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 GATA3P23771 443 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 THBS2P35442 1172 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 PMELP40967 661 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 GPM6AP51674 278 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 LMO4P61968 165 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 ZMYND11Q15326 602 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 YIF1BQ5BJH7 314 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 CEP78Q5JTW2 689 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 FAM27D1Q5T7N8 215 aa11.74□□□□□ -0.53
PKNOX1-209ENST00000560448 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms