RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TM7SF3Q9NS93 570 aa16.91■□□□□ 0.3
SEMA4B-215ENST00000560089 LAMP3Q9UQV4 416 aa16.91■□□□□ 0.3
SEMA4B-215ENST00000560089 NPIPA5A0A0B4J1W7 369 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 NPIPA7E9PJI5 369 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 NDUFB8O95169 186 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 NPIPA8P0DM63 369 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 DMWDQ09019 674 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 CMTM1Q8IZ96 169 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 STT3BQ8TCJ2 826 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 RTBDNQ9BSG5 229 aaPredicted RBP16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 ABHD14AQ9BUJ0 271 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 TAC3Q9UHF0 121 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 LOC105371242A0A075B767 164 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 GNB3P16520 340 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 PRLHRP49683 370 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 HIST1H3AP68431 136 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 ZNF506Q5JVG8 444 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 WDR25Q64LD2 544 aaPredicted RBP16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 TOMM20LQ6UXN7 152 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 ZNF793Q6ZN11 406 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 ZFP62Q8NB50 900 aaPredicted RBP16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 FNDC9Q8TBE3 224 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 DHDHQ9UQ10 334 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 ENTPD2Q9Y5L3 495 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 CACNA1CQ13936 2221 aa16.9■□□□□ 0.3
SEMA4B-215ENST00000560089 CDC14CA4D256 554 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 RPS27P42677 84 aaKnown RBP16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 C2orf27AQ580R0 203 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 P4HA3Q7Z4N8 544 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 MS4A10Q96PG2 267 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 OPN1LWP04000 364 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 FPR2P25090 351 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 RANP62826 216 aaKnown RBP16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 PNRC1Q12796 327 aaPredicted RBP16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 HNRNPA1L2Q32P51 320 aaKnown RBP16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 DTWD2Q8NBA8 298 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 ARRDC3Q96B67 414 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 ELSPBP1Q96BH3 223 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 SCGB3A2Q96PL1 93 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 P4HTMQ9NXG6 502 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 PAM16Q9Y3D7 125 aa16.89■□□□□ 0.29
SEMA4B-215ENST00000560089 C4orf47A7E2U8 309 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 M0QZ24 198 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 STATHP02808 62 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 MMP9P14780 707 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 RPL23AP62750 156 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 POLR2LP62875 67 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 GNB2P62879 340 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 TMEM170AQ8WVE7 144 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 FAM46BQ96A09 425 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 LPAR4Q99677 370 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 OBP2AQ9NY56 170 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 AK3Q9UIJ7 227 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 CLDN16Q9Y5I7 305 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 A0A1W2PR48 441 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 E5RGE8 158 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 SOX1O00570 391 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 ITPRIPL2Q3MIP1 535 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 Q7L0L9 218 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 SMRP1Q8NCR6 262 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 OR5T1Q8NG75 326 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 OR6N2Q8NGY6 317 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 OR2AJ1Q8NGZ0 328 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 THAP3Q8WTV1 239 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 KTI12Q96EK9 354 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 CIB3Q96Q77 187 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 C6orf106Q9H6K1 298 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 COLQQ9Y215 455 aaPredicted RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 NSG2Q9Y328 171 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 ANKUB1A6NFN9 424 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 OR5G3P0C626 314 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 GLRA1P23415 457 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 SPOCK1Q08629 439 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 ENDOGQ14249 297 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 TDRG1Q3Y452 100 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 DPY19L2P2Q6ZN68 376 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 CDC20BQ86Y33 519 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 OR2G3Q8NGZ4 309 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 ZCCHC14Q8WYQ9 949 aaKnown RBP16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 SLC22A13Q9Y226 551 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 HEATR5BQ9P2D3 2071 aa16.88■□□□□ 0.29
SEMA4B-215ENST00000560089 SCDO00767 359 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 GPR137BO60478 399 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 DBIP07108 87 aaKnown RBP16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 NID1P14543 1247 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 ARHGAP11BQ3KRB8 267 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 MFSD12Q6NUT3 480 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 OR8G5Q8NG78 346 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 FGGYQ96C11 551 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 SDF2Q99470 211 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 C1orf123Q9NWV4 160 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 MUC3AQ02505 3323 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 EML5Q05BV3 1969 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 CD46P15529 392 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 RBMXP38159 391 aaKnown RBP16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 RAB11AP62491 216 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 MMDQ15546 238 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 TMEM183BQ1AE95 376 aa16.87■□□□□ 0.29
SEMA4B-215ENST00000560089 TUBD1Q9UJT1 453 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms