RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ACTL9Q8TC94 416 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 RNF138Q8WVD3 245 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 HGDQ93099 445 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TCEAL3Q969E4 200 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 MRAP2Q96G30 205 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 ZNF799Q96GE5 643 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 MBOAT7Q96N66 472 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 ZNF285Q96NJ3 590 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 OR2M4Q96R27 311 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TMED9Q9BVK6 235 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 SFXN3Q9BWM7 321 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 DHX35Q9H5Z1 703 aaKnown RBP2.48□□□□□ -2.01
SPG11-218ENST00000559754 EXOSC4Q9NPD3 245 aaKnown RBP2.48□□□□□ -2.01
SPG11-218ENST00000559754 HEBP1Q9NRV9 189 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 RBM22Q9NW64 420 aaKnown RBP eCLIP2.48□□□□□ -2.01
SPG11-218ENST00000559754 COMMD9Q9P000 198 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 TRAPPC4Q9Y296 219 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 HES2Q9Y543 173 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 MTCH2Q9Y6C9 303 aa2.48□□□□□ -2.01
SPG11-218ENST00000559754 IGHV3-74A0A0B4J1X5 117 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TRAV8-6A0A0B4J262 113 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 IGKV1-8A0A0C4DH67 115 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TAAR5O14804 337 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 PHYHO14832 338 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 NPIPB7O75200 414 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 GLSO94925 669 aaPredicted RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 IGKV1D-16P01601 117 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TRBV12-3P01733 135 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 RLN2P04090 185 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 IGKV3-11P04433 115 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 HLA-DPB1P04440 258 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 MRPL3P09001 348 aaKnown RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 C8orf88P0DMB2 117 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 NQO1P15559 274 aaKnown RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 F8A1P23610 371 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 PSMB9P28065 219 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 HTR1EP28566 365 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TALDO1P37837 337 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 CAV2P51636 162 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 NKX2-5P52952 324 aaPredicted RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 NUP107P57740 925 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TAS2R46P59540 309 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 GINS1Q14691 196 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 C16orf72Q14CZ0 275 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TBC1D28Q2M2D7 210 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 RSPO1Q2MKA7 263 aaPredicted RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 SLC25A35Q3KQZ1 300 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 ORMDL2Q53FV1 153 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TMEM255AQ5JRV8 349 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TMEM31Q5JXX7 168 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 HES5Q5TA89 166 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 OGFRL1Q5TC84 451 aaPredicted RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 ZNF530Q6P9A1 599 aaPredicted RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 UGT2A3Q6UWM9 527 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 LYPD2Q6UXB3 125 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 ACP7Q6ZNF0 438 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 RTL4Q6ZR62 310 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 C10orf107Q8IVU9 208 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 PRSS58Q8IYP2 241 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 Q8N402 240 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 OR10G4Q8NGN3 311 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 DCUN1D4Q92564 292 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 RERGQ96A58 199 aaPredicted RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 DDIT4LQ96D03 193 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 SMIM19Q96E16 107 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TMEM56Q96MV1 263 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 GPR22Q99680 433 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 PITX2Q99697 317 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 UGT2B28Q9BY64 529 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 SPNS1Q9H2V7 528 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 RHOFQ9HBH0 211 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 HRASLSQ9HDD0 168 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TMEM100Q9NV29 134 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 BABAM2Q9NXR7 383 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 NUFIP1Q9UHK0 495 aaKnown RBP2.47□□□□□ -2.01
SPG11-218ENST00000559754 SIGLEC7Q9Y286 467 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 TP53TG5Q9Y2B4 290 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 ORC6Q9Y5N6 252 aa2.47□□□□□ -2.01
SPG11-218ENST00000559754 MAP3K15Q6ZN16 1313 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 SCN2AQ99250 2005 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 NPHP4O75161 1426 aaPredicted RBP2.46□□□□□ -2.02
SPG11-218ENST00000559754 SMIM26A0A096LP01 95 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 PLAC8L1A1L4L8 177 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 OR6C70A6NIJ9 312 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 ZFP92A6NM28 416 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 OR2AT4A6NND4 320 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 LRRN3E7EW58 273 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 F5H5K5 113 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 F5H768 121 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 H0Y980 276 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 M0QZ92 97 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 M0R036 132 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 KLF8O95600 359 aaPredicted RBP2.46□□□□□ -2.02
SPG11-218ENST00000559754 ATP6V1G2O95670 118 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 IFNA5P01569 189 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 PCCAP05165 728 aaPredicted RBP2.46□□□□□ -2.02
SPG11-218ENST00000559754 CTXN2P0C2S0 81 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 ZNF7P17097 686 aaPredicted RBP2.46□□□□□ -2.02
SPG11-218ENST00000559754 CELP19835 753 aa2.46□□□□□ -2.02
SPG11-218ENST00000559754 TSPOP30536 169 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms