RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ACTG2P63267 376 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 SMIM21Q3B7S5 101 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 ZNF573Q86YE8 665 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 CALHM1Q8IU99 346 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 KIR3DL3Q8N743 410 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 CCDC54Q8NEL0 328 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 ZNF671Q8TAW3 534 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 TRMT10AQ8TBZ6 339 aaKnown RBP9.03□□□□□ -0.96
SPG11-216ENST00000559347 APH1BQ8WW43 257 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 STMN2Q93045 179 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 TMIGD2Q96BF3 282 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 ZNF488Q96MN9 340 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 DUX5Q96PT3 197 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 FAM118AQ9NWS6 357 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 SLC25A10Q9UBX3 287 aaPredicted RBP9.03□□□□□ -0.96
SPG11-216ENST00000559347 KPTNQ9Y664 436 aa9.03□□□□□ -0.96
SPG11-216ENST00000559347 CENPVL3A0A0U1RRI6 287 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 LOC100130705A0A1B0GUX0 176 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 TMEM89A2RUT3 159 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 GATBO75879 557 aaKnown RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 IGHA1P01876 353 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 RNASE1P07998 156 aaKnown RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 PRTN3P24158 256 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 COMPP49747 757 aaPredicted RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 CAV3P56539 151 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 OR12D2P58182 307 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 BPIFB3P59826 476 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 ARF6P62330 175 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 BAMBIQ13145 260 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 PDCD1Q15116 288 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 UBE2V2Q15819 145 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 FDX2Q6P4F2 183 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 ACP7Q6ZNF0 438 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 VMO1Q7Z5L0 202 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 KCTD20Q7Z5Y7 419 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 ACBD7Q8N6N7 88 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 ZNRF1Q8ND25 227 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 OR2G2Q8NGZ5 317 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 RHOXF1Q8NHV9 184 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 NPRL2Q8WTW4 380 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 H1FXQ92522 213 aaKnown RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 C10orf35Q96D05 121 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 PELI1Q96FA3 418 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 MED30Q96HR3 178 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 C4orf36Q96KX1 117 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 DMRTB1Q96MA1 342 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 RDH12Q96NR8 316 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 NRIP2Q9BQI9 281 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 PKIBQ9C010 78 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 ELL3Q9HB65 397 aaPredicted RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 HES4Q9HCC6 221 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 SMPD3Q9NY59 655 aaPredicted RBP9.02□□□□□ -0.97
SPG11-216ENST00000559347 RASL12Q9NYN1 266 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 FRRS1LQ9P0K9 344 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 ONECUT1Q9UBC0 465 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 POLDIP2Q9Y2S7 368 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 MAB21L2Q9Y586 359 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 PCDHGB1Q9Y5G3 927 aa9.02□□□□□ -0.97
SPG11-216ENST00000559347 IGKV1-27A0A075B6S5 117 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 CLDN34H7C241 214 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 BAG2O95816 211 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 ISG15P05161 165 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 HTR1AP08908 422 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 GABRA2P47869 451 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 ERVK11-1P61568 191 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 RAB40BQ12829 278 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 IL24Q13007 206 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 GALEQ14376 348 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 SLC9A3R2Q15599 337 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 TMEM244Q5VVB8 128 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 C12orf54Q6X4T0 127 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 RDH10Q8IZV5 341 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 BATF2Q8N1L9 274 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 TMEM185AQ8NFB2 350 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 PP6455Q8WZ26 134 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 LHX4Q969G2 390 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 SDSLQ96GA7 329 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 Q96MT0 163 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 ADI1Q9BV57 179 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 ALG8Q9BVK2 526 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 PRDM13Q9H4Q3 707 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 CNTD2Q9H8S5 307 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 AMBNQ9NP70 447 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 SLC7A11Q9UPY5 501 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 MYRFQ9Y2G1 1151 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 NBEAL1Q6ZS30 2694 aa9.01□□□□□ -0.97
SPG11-216ENST00000559347 IGHV1-69DA0A0B4J2H0 117 aa9□□□□□ -0.97
SPG11-216ENST00000559347 FAM230AA0A1W2PPH8 454 aa9□□□□□ -0.97
SPG11-216ENST00000559347 RFPL4AA6NLU0 287 aa9□□□□□ -0.97
SPG11-216ENST00000559347 RFPL4AL1F8VTS6 287 aa9□□□□□ -0.97
SPG11-216ENST00000559347 J3QLW9 94 aa9□□□□□ -0.97
SPG11-216ENST00000559347 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
SPG11-216ENST00000559347 WBP4O75554 376 aaKnown RBP9□□□□□ -0.97
SPG11-216ENST00000559347 NXPH2O95156 264 aa9□□□□□ -0.97
SPG11-216ENST00000559347 IGHV1-69P01742 117 aa9□□□□□ -0.97
SPG11-216ENST00000559347 ZNF19P17023 458 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms