RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CALHM1Q8IU99 346 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 OR13C9Q8NGT0 318 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 TMIGD2Q96BF3 282 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 SCN3BQ9NY72 215 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 SIRT4Q9Y6E7 314 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-206ENST00000558649 SONP18583 2426 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 SETD2Q9BYW2 2564 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 IGKV1-27A0A075B6S5 117 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 LOC105371242A0A075B767 164 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 NKX6-3A6NJ46 265 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 NDUFA2O43678 99 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 ADRA2CP18825 462 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 AZGP1P25311 298 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 SOX2P48431 317 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 FUT6P51993 359 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 IKZF1Q13422 519 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 WDR25Q64LD2 544 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 ZNF841Q6ZN19 808 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 FAM216BQ8N7L0 139 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 ST8SIA4Q92187 359 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 RGP1Q92546 391 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 SGCDQ92629 289 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 TMPRSS13Q9BYE2 586 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 FKBP14Q9NWM8 211 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 NLKQ9UBE8 527 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 POLDIP2Q9Y2S7 368 aa13.2□□□□□ -0.3
RABGGTA-206ENST00000558649 IGKV1-9A0A0C4DH69 117 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 DVL1O14640 695 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 NXPH2O95156 264 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 AVPP01185 164 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 CDK1P06493 297 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 FAM157CP0CG43 387 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 ATF1P18846 271 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 GABRA2P47869 451 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 POU3F4P49335 361 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 STUMQ69YW2 141 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 UTS2BQ765I0 119 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 SLC36A1Q7Z2H8 476 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 FGFRL1Q8N441 504 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 POC1AQ8NBT0 407 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 OR13C5Q8NGS8 318 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 MYDGFQ969H8 173 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 SLAMF9Q96A28 289 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 SPACA5Q96QH8 159 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 PAK1IP1Q9NWT1 392 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
RABGGTA-206ENST00000558649 IGHV2-70DA0A0C4DH43 119 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 OR2AT4A6NND4 320 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 J3QLI3 93 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 RPSAP08865 295 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 PGA5P0DJD9 388 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 SELLP14151 372 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 PRKACBP22694 351 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 GATA3P23771 443 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 CPT2P23786 658 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 RBP2P50120 134 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 NPY4RP50391 375 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 ATP1B3P54709 279 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 MTCP1P56278 107 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 WNT4P56705 351 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 BTNL3Q6UXE8 466 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 ACP7Q6ZNF0 438 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 SLC25A26Q70HW3 274 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 GPR148Q8TDV2 347 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 PKIBQ9C010 78 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 ZCCHC4Q9H5U6 513 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 RAB26Q9ULW5 256 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 POLR3KQ9Y2Y1 108 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 TPRKBQ9Y3C4 175 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 PCDHGB5Q9Y5G0 923 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 INSIG2Q9Y5U4 225 aa13.18□□□□□ -0.3
RABGGTA-206ENST00000558649 PPIAL4CA0A0B4J2A2 164 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 C22orf46C9J442 243 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 OGG1O15527 345 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 SPRY1O43609 319 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 NDUFB3O43676 98 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 FCN3O75636 299 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 HCKP08631 526 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 MPZP25189 248 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 CEBPDP49716 269 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 TAS2R43P59537 309 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 IL24Q13007 206 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 DOC2BQ14184 412 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 LHFPL2Q6ZUX7 228 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 PRIMA1Q86XR5 153 aa13.17□□□□□ -0.3
RABGGTA-206ENST00000558649 SERPINA12Q8IW75 414 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms