RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 BHLHA15Q7RTS1 189 aaPredicted RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 MRPL21Q7Z2W9 205 aaKnown RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 ZNF554Q86TJ5 538 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 FJX1Q86VR8 437 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 OR10R2Q8NGX6 335 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 KCNG3Q8TAE7 436 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 C7orf50Q9BRJ6 194 aaKnown RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 NUDT16L1Q9BRJ7 211 aaKnown RBP6.32□□□□□ -1.4
SPG11-204ENST00000557866 TM2D1Q9BX74 207 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 SELENOIQ9C0D9 397 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 GHRLQ9UBU3 117 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 KCNN3Q9UGI6 736 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 TUBD1Q9UJT1 453 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 KCNK7Q9Y2U2 307 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 SLC25A15Q9Y619 301 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 MED12LQ86YW9 2145 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 PTPRQQ9UMZ3 2332 aa6.32□□□□□ -1.4
SPG11-204ENST00000557866 PRRC2CQ9Y520 2896 aaKnown RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 IGHV1-18A0A0C4DH31 117 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 A0A0G2JNJ9 132 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PQLC2LA1A4F0 135 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 METTL21EPA6NDL7 271 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 OR5H1A6NKK0 313 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 INMT-MINDY4F8WBC2 141 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 BOLA2-SMG1P6H3BVE0 249 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 SPRY1O43609 319 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 SSX5O60225 188 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 RBBP9O75884 186 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 LPLP06858 475 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 CHRM2P08172 466 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 CECR9P0C854 216 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 TMEM225BP0DP42 221 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 ZNF35P13682 527 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 HIST1H1DP16402 221 aaKnown RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 MGMTP16455 207 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 SERPINA2P20848 420 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 RBP2P50120 134 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PPP1CBP62140 327 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 BTG1P62324 171 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 RPS27AP62979 156 aaKnown RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 PDZK1IP1Q13113 114 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PRDX4Q13162 271 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 DAZAP2Q15038 168 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 TBC1D28Q2M2D7 210 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 EIF2S3LQ2VIR3 472 aaKnown RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 PCGF3Q3KNV8 242 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 ALKBH6Q3KRA9 238 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 RSBN1Q5VWQ0 802 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 SFRP4Q6FHJ7 346 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 OR2T2Q6IF00 324 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 FBXW12Q6X9E4 464 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 BTN2A1Q7KYR7 527 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 CALHM1Q8IU99 346 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 LIX1LQ8IVB5 337 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 ZDHHC23Q8IYP9 409 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 C17orf78Q8N4C9 275 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PNLDC1Q8NA58 520 aaKnown RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 CHST4Q8NCG5 386 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 CSNK2A3Q8NEV1 391 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 OR4D10Q8NGI6 311 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 CREB3L1Q96BA8 519 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PHF21AQ96BD5 680 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PPP1R14BQ96C90 147 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 BORCS8Q96FH0 119 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 SFXN3Q9BWM7 321 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 PAPOLGQ9BWT3 736 aaKnown RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 TMEM59Q9BXS4 323 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 CACNG6Q9BXT2 260 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 TP63Q9H3D4 680 aaPredicted RBP6.31□□□□□ -1.4
SPG11-204ENST00000557866 DPAGT1Q9H3H5 408 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 SCPEP1Q9HB40 452 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 CDH20Q9HBT6 801 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 ZNF581Q9P0T4 197 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 Q9UFV3 132 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 TINAGQ9UJW2 476 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 SLC7A11Q9UPY5 501 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 ALG5Q9Y673 324 aa6.31□□□□□ -1.4
SPG11-204ENST00000557866 IGF2RP11717 2491 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 TRAV6A0A075B6T7 132 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 NAP1L6A6NFF2 107 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 CENPXA8MT69 81 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 A8MXE2 369 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 MFNGO00587 321 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 PRRG2O14669 202 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 PLATP00750 562 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 CD3DP04234 171 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 TCRBP04435 133 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 SFTPBP07988 381 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 GTF2F2P13984 249 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 CALCRP30988 508 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 MPV17P39210 176 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 RANBP1P43487 201 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 ATP1B3P54709 279 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 UCP2P55851 309 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 RAB25P57735 213 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 AP3S2P59780 193 aa6.3□□□□□ -1.4
SPG11-204ENST00000557866 SSBP1Q04837 148 aaKnown RBP6.3□□□□□ -1.4
SPG11-204ENST00000557866 TATDN3Q17R31 274 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms