RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 OR5D14Q8NGL3 314 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 UFD1Q92890 307 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 SPSB1Q96BD6 273 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 C1orf159Q96HA4 380 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 TMED9Q9BVK6 235 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 SNTG1Q9NSN8 517 aa14.62□□□□□ -0.07
SHMT2-225ENST00000556798 NSD1Q96L73 2696 aaPredicted RBP14.62□□□□□ -0.07
SHMT2-225ENST00000556798 SONP18583 2426 aaKnown RBP14.62□□□□□ -0.07
SHMT2-225ENST00000556798 TRAV38-1A0A0B4J264 116 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 A0A1W2PPK0 400 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 F5H0A9 414 aaPredicted RBP14.61□□□□□ -0.07
SHMT2-225ENST00000556798 INMTO95050 263 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 FSTL3O95633 263 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 TGFAP01135 160 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 CD1AP06126 327 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 HCKP08631 526 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 PRKACBP22694 351 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 GLRA1P23415 457 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 POU3F4P49335 361 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 RBP2P50120 134 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 ATP1B3P54709 279 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 MTCP1P56278 107 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 DCDC5Q6ZRR9 648 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 LHFPL2Q6ZUX7 228 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 DNAAF1Q8NEP3 725 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 OR5T2Q8NGG2 359 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 ZNF671Q8TAW3 534 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 YTHDF1Q9BYJ9 559 aaKnown RBP14.61□□□□□ -0.07
SHMT2-225ENST00000556798 PKIBQ9C010 78 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 ACOT13Q9NPJ3 140 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 YAE1D1Q9NRH1 226 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 DNAJB11Q9UBS4 358 aa14.61□□□□□ -0.07
SHMT2-225ENST00000556798 ANK3Q12955 4377 aaKnown RBP14.6□□□□□ -0.07
SHMT2-225ENST00000556798 B4DSR2 109 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 TFF1P04155 84 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 PGA5P0DJD9 388 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 RAB3AP20336 220 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 MPZP25189 248 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 EMX1Q04741 257 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-225ENST00000556798 MLLT11Q13015 90 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-225ENST00000556798 INSL4Q14641 139 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 MICBQ29980 383 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 SLC25A26Q70HW3 274 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 ZNF367Q7RTV3 350 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 SPARTQ8N0X7 666 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 POC1AQ8NBT0 407 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 OR5D18Q8NGL1 313 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 SLAMF9Q96A28 289 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 MGLLQ99685 303 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 CTSZQ9UBR2 303 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 MIOXQ9UGB7 285 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 POLDIP2Q9Y2S7 368 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 LRRC42Q9Y546 428 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 HIVEP2P31629 2446 aa14.6□□□□□ -0.07
SHMT2-225ENST00000556798 TRBV5-7A0A0A0MS05 114 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 A0A1B0GW55 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 ZNF879B4DU55 563 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 PHF1O43189 567 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 ADAM20O43506 726 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 SPRY1O43609 319 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 MRPS14O60783 128 aaKnown RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 MSMBP08118 114 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 WNT2P09544 360 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L2P0CJ85 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L3P0CJ86 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L4P0CJ87 422 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L5P0CJ88 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L6P0CJ89 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L7P0CJ90 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 MUC1P15941 1255 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 RPS25P62851 125 aaKnown RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 LCN2P80188 198 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 IL24Q13007 206 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 KCNJ8Q15842 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 FAM166AQ6J272 317 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 ZNF529Q6P280 563 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 CRIP3Q6Q6R5 217 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4L9Q6RFH8 374 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 SVOPQ8N4V2 548 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 OR8B3Q8NGG8 313 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 OR51F2Q8NH61 342 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 TMEM203Q969S6 136 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 TMIGD2Q96BF3 282 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 NEIL1Q96FI4 390 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DERL3Q96Q80 235 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 OR8B2Q96RD0 313 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 NKX3-1Q99801 234 aaPredicted RBP14.59□□□□□ -0.07
SHMT2-225ENST00000556798 NRIP2Q9BQI9 281 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 NLKQ9UBE8 527 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 DUX4Q9UBX2 424 aa14.59□□□□□ -0.07
SHMT2-225ENST00000556798 TRAV8-7A0A075B6U6 113 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 MAGEA13PA6NCF6 341 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 F8VVB4 439 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 F8VWA3 439 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 TNFRSF13BO14836 293 aaPredicted RBP14.58□□□□□ -0.08
SHMT2-225ENST00000556798 ANGPTL7O43827 346 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 CPEP16870 476 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 ZFP36P26651 326 aaKnown RBP14.58□□□□□ -0.08
SHMT2-225ENST00000556798 PITPNBP48739 271 aa14.58□□□□□ -0.08
SHMT2-225ENST00000556798 PPP3R1P63098 170 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms