RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 PDPK2PQ6A1A2 396 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 CLEC6AQ6EIG7 209 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 OPN5Q6U736 354 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 Q6ZT83 130 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 C17orf78Q8N4C9 275 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 DRAM1Q8N682 238 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 LRRC52Q8N7C0 313 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF645Q8N7E2 425 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 ZFAND1Q8TCF1 268 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 C17orf50Q8WW18 174 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 RERGQ96A58 199 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-221ENST00000556534 SERPINB11Q96P15 392 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 RBBP8Q99708 897 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 COPS4Q9BT78 406 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 SFXN3Q9BWM7 321 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 PORCNQ9H237 461 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 C8orf17Q9NRJ1 99 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 CD300AQ9UGN4 299 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 PPIL1Q9Y3C6 166 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 HES2Q9Y543 173 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 LOXHD1Q8IVV2 1947 aa2.24□□□□□ -2.05
SCFD1-221ENST00000556534 CECR2Q9BXF3 1484 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 IGHV3-72A0A0B4J1Y9 119 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 TRPC5OSA6NMA1 111 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 GOLGA8JA6NMD2 632 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 MANBAO00462 879 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF593O00488 134 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-221ENST00000556534 FADS2O95864 444 aaKnown RBP2.23□□□□□ -2.05
SCFD1-221ENST00000556534 GP1BAP07359 652 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 MMP7P09237 267 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF806P0C7X5 589 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 GOLGA8HP0CJ92 632 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 SLC35E2BP0CK96 405 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 MAGEA3P43357 314 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 MAGEA6P43360 314 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 RANBP1P43487 201 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 VSNL1P62760 191 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 IL5RAQ01344 420 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 RNASE13Q5GAN3 156 aaKnown RBP2.23□□□□□ -2.05
SCFD1-221ENST00000556534 NELFCDQ8IXH7 590 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 GAPTQ8N292 157 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 OR13G1Q8NGZ3 307 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 PDCD6IPQ8WUM4 868 aaKnown RBP2.23□□□□□ -2.05
SCFD1-221ENST00000556534 DCAKDQ8WVC6 231 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 ING5Q8WYH8 240 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 OR5P2Q8WZ92 322 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 GTF2H4Q92759 462 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 CDS1Q92903 461 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 Q96MT0 163 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF396Q96N95 335 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-221ENST00000556534 PDCD1LG2Q9BQ51 273 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 EMC6Q9BV81 110 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 COA1Q9GZY4 146 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 PRORYQ9H606 182 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 TMBIM4Q9HC24 238 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 C6orf50Q9HD87 102 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 RHBDL2Q9NX52 303 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 AP3M1Q9Y2T2 418 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 MIA3Q5JRA6 1907 aa2.23□□□□□ -2.05
SCFD1-221ENST00000556534 SETD1AO15047 1707 aaKnown RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 AHDC1Q5TGY3 1603 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 TRAV8-6A0A0B4J262 113 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 PLPP3O14495 311 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 CETN3O15182 167 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 SGCEO43556 437 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 CCDC22O60826 627 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 SHOX2O60902 331 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 SCN2BO60939 215 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 LDOC1O95751 146 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 HLA-DQA1P01909 254 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 MT-ND4P03905 459 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 CD74P04233 296 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 IL4P05112 153 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 APLNRP35414 380 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 OR12D2P58182 307 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 TAS2R31P59538 309 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 IFITM3Q01628 133 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 ZNF616Q08AN1 781 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 PMS2P3Q13401 168 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 NAB1Q13506 487 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 TPBGQ13641 420 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 IGFBP7Q16270 282 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 TTC32Q5I0X7 151 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 RESP18Q5W5W9 173 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 ZFP1Q6P2D0 407 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 ERICH5Q6P6B1 374 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 AHSA2Q719I0 299 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 ERO1BQ86YB8 467 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 OR4M1Q8NGD0 313 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 OR1J4Q8NGS1 313 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 CLHC1Q8NHS4 586 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 TMEM159Q96B96 161 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 S100PBPQ96BU1 408 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 TRNT1Q96Q11 434 aaKnown RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 CYTH2Q99418 400 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 LLPHQ9BRT6 129 aaKnown RBP2.22□□□□□ -2.05
SCFD1-221ENST00000556534 PLEKHF2Q9H8W4 249 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 SCML1Q9UN30 329 aa2.22□□□□□ -2.05
SCFD1-221ENST00000556534 SLC7A11Q9UPY5 501 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms