RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 PHYHIPQ92561 330 aa11.82□□□□□ -0.52
VIPAS39-208ENST00000556412 RAB1CQ92928 201 aa11.82□□□□□ -0.52
VIPAS39-208ENST00000556412 SLAMF9Q96A28 289 aa11.82□□□□□ -0.52
VIPAS39-208ENST00000556412 YIPF6Q96EC8 236 aa11.82□□□□□ -0.52
VIPAS39-208ENST00000556412 TXNL4BQ9NX01 149 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-208ENST00000556412 TRIM64BA6NI03 449 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 NDUFS8O00217 210 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 ANGPTL7O43827 346 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 EGR1P18146 543 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 LSM3P62310 102 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 RIN1Q13671 783 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 ZNF181Q2M3W8 571 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 TIMM50Q3ZCQ8 353 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PRSS57Q6UWY2 283 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 GCSAMQ8N6F7 178 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 TNFAIP8L1Q8WVP5 186 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 ELL3Q9HB65 397 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 SNTG1Q9NSN8 517 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 GSTK1Q9Y2Q3 226 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 NPTNQ9Y639 398 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 ITPR2Q14571 2701 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 USF3Q68DE3 2245 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 WNT9BO14905 357 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 AIREO43918 545 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 GALP22466 123 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 OR3A4PP47883 348 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 BTG1P62324 171 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 IL24Q13007 206 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PDZK1IP1Q13113 114 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 LRRTM1Q86UE6 522 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 NKAIN3Q8N8D7 197 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PNLDC1Q8NA58 520 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 SEH1LQ96EE3 360 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 FUNDC2Q9BWH2 189 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PKIBQ9C010 78 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 WDR13Q9H1Z4 485 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 RNF167Q9H6Y7 350 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 DNAJB11Q9UBS4 358 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 AK6Q9Y3D8 172 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
VIPAS39-208ENST00000556412 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 PDZD2O15018 2839 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 ALDOBP05062 364 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 CALCBP10092 127 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 ADRA2CP18825 462 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 GLRA1P23415 457 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 NR4A2P43354 598 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 RPL5P46777 297 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 ALDH3B2P48448 385 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 ZMYND11Q15326 602 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 GPR107Q5VW38 600 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 DNM1P46Q6ZS02 220 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 MKXQ8IYA7 352 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 OR51F2Q8NH61 342 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
VIPAS39-208ENST00000556412 NOTCH2Q04721 2471 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 SMIM30A4D0T7 59 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 MEGF11A6BM72 1044 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 RNF223E7ERA6 249 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 TRAPPC2LH3BP13 241 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 NXPH2O95156 264 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 MPZP25189 248 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 GIFP27352 417 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 FGF9P31371 208 aaPredicted RBP11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 GLT8D1Q68CQ7 371 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 POC1AQ8NBT0 407 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 OR10Z1Q8NGY1 313 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 CEP19Q96LK0 163 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 KCTD7Q96MP8 289 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 S100A13Q99584 98 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 GAL3ST1Q99999 423 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 MTCH1Q9NZJ7 389 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 ING4Q9UNL4 249 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 SHISA3A0PJX4 238 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 OOEPA6NGQ2 149 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 SRRM5B3KS81 715 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 PGA5P0DJD9 388 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 SLC25A16P16260 332 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 PTGFRP43088 359 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 ZP1P60852 638 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 CRIP3Q6Q6R5 217 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 OR5T2Q8NGG2 359 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 CNTD2Q9H8S5 307 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 PLGRKTQ9HBL7 147 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 CSMD1Q96PZ7 3565 aa11.79□□□□□ -0.52
VIPAS39-208ENST00000556412 IGKV1-12A0A0C4DH73 117 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 LGALS8O00214 317 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 PDCD5O14737 125 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 CDRT1O95170 752 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 LHBP01229 141 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 IGKV1D-12P01611 117 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 IGHV2-70P01814 119 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 BCL3P20749 454 aa11.78□□□□□ -0.52
VIPAS39-208ENST00000556412 TGFBR1P36897 503 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms