RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 PGAP1Q75T13 922 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 MRPL21Q7Z2W9 205 aaKnown RBP4.77□□□□□ -1.65
PRKCH-220ENST00000556164 FAM122BQ7Z309 247 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 CALHM3Q86XJ0 350 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 SERPINA12Q8IW75 414 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 ZNF679Q8IYX0 411 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 OFCC1Q8IZS5 231 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 FGFRL1Q8N441 504 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 KLHDC1Q8N7A1 406 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 NUDT10Q8NFP7 164 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 OR14K1Q8NGZ2 314 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 OR5R1Q8NH85 324 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 LZICQ8WZA0 190 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 SLCO4A1Q96BD0 722 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 TLCD1Q96CP7 247 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 NUDT11Q96G61 164 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 PITX2Q99697 317 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 SH3GL1Q99961 368 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 FNDC11Q9BVV2 318 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 SLC22A4Q9H015 551 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 SRD5A3Q9H8P0 318 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 NMNAT1Q9HAN9 279 aaPredicted RBP4.77□□□□□ -1.65
PRKCH-220ENST00000556164 NECAP2Q9NVZ3 263 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 C1orf123Q9NWV4 160 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 RPUSD1Q9UJJ7 312 aaKnown RBP4.77□□□□□ -1.65
PRKCH-220ENST00000556164 FOXJ3Q9UPW0 622 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 SIGLEC9Q9Y336 463 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 NOP16Q9Y3C1 178 aaKnown RBP4.77□□□□□ -1.65
PRKCH-220ENST00000556164 KPTNQ9Y664 436 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 LHFPL6Q9Y693 200 aa4.77□□□□□ -1.65
PRKCH-220ENST00000556164 A0A087WUU8 490 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 A0A1B0GW55 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 MEIOCA2RUB1 952 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 GGT3PA6NGU5 568 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 CD300LBA8K4G0 201 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 RNASEK-C17orf49H0YIS7 233 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 H3BUX3 64 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 XPNPEP2O43895 674 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 GMDSO60547 372 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 NDUFB2O95178 105 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 IFNW1P05000 195 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L2P0CJ85 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L3P0CJ86 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L4P0CJ87 422 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L5P0CJ88 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L6P0CJ89 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L7P0CJ90 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 GALP22466 123 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 SAA4P35542 130 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 GGT2P36268 569 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 ETV1P50549 477 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 EFNB2P52799 333 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DLX1P56177 255 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 HIST1H3AP68431 136 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 TRAP1Q12931 704 aaKnown RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 LY6EQ16553 131 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 KCNMB1Q16558 191 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 RSPO1Q2MKA7 263 aaPredicted RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 NSUN5P1Q3KNT7 163 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 VAX1Q5SQQ9 334 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 HIST2H3PS2Q5TEC6 136 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DNM1P34Q6PK57 102 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4L9Q6RFH8 374 aaPredicted RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 TBPL2Q6SJ96 375 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 COLCA1Q6ZS62 124 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 HIST2H3AQ71DI3 136 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 RNF144BQ7Z419 303 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 VTCN1Q7Z7D3 282 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 NAA40Q86UY6 237 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 ZNF573Q86YE8 665 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 ADGRG5Q8IZF4 528 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 RNF113BQ8IZP6 322 aaKnown RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 LYG1Q8N1E2 194 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 LNX2Q8N448 690 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 PNKDQ8N490 385 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 GCSAMQ8N6F7 178 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 SPERTQ8NA61 448 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 OR8J3Q8NGG0 315 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 OR4C13Q8NGP0 309 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 OR2AE1Q8NHA4 323 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 OR2T6Q8NHC8 308 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 SUN5Q8TC36 379 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 RNASE8Q8TDE3 154 aaKnown RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 NPRL2Q8WTW4 380 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 ACOT11Q8WXI4 607 aaPredicted RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 HARBI1Q96MB7 349 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 TSSK2Q96PF2 358 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 RBM14Q96PK6 669 aaKnown RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 FYTTD1Q96QD9 318 aaKnown RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 ATF6BQ99941 703 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 TMBIM4Q9HC24 238 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 AURKAIP1Q9NWT8 199 aaPredicted RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 SMPD3Q9NY59 655 aaPredicted RBP4.76□□□□□ -1.65
PRKCH-220ENST00000556164 OR6C3Q9NZP0 311 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 DUX4Q9UBX2 424 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 IER3IP1Q9Y5U9 82 aa4.76□□□□□ -1.65
PRKCH-220ENST00000556164 NBEAL2Q6ZNJ1 2754 aa4.75□□□□□ -1.65
PRKCH-220ENST00000556164 LINC00854A0A1B0GVQ3 168 aa4.75□□□□□ -1.65
PRKCH-220ENST00000556164 CGB1A6NKQ9 187 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms