RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 LHBP01229 141 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 COL8A2P25067 703 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 CFPP27918 469 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 RPS19P39019 145 aaKnown RBP10.52□□□□□ -0.73
SHMT2-221ENST00000555773 PTH2RP49190 550 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 ATP5J2P56134 94 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 ZP1P60852 638 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 NCS1P62166 190 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 CRIP3Q6Q6R5 217 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 WDR82Q6UXN9 313 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 SLC25A26Q70HW3 274 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 OR6M1Q8NGM8 313 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 OR51F2Q8NH61 342 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 TNFAIP8L1Q8WVP5 186 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 CCL17Q92583 94 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 ISOC1Q96CN7 298 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 S100A13Q99584 98 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 GFI1Q99684 422 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 RBM38Q9H0Z9 239 aaKnown RBP10.52□□□□□ -0.73
SHMT2-221ENST00000555773 CNTD2Q9H8S5 307 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 RASL12Q9NYN1 266 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 FBN2P35556 2912 aa10.52□□□□□ -0.73
SHMT2-221ENST00000555773 NOTCH2Q04721 2471 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 TACC2O95359 2948 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 LRBAP50851 2863 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 hCG_1807616A0A1W2PRN6 198 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 CCDC160A6NGH7 325 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 IFITM5A6NNB3 132 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 TRAPPC2LH3BP13 241 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 TMEM178BH3BS89 294 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 SLC17A2O00624 439 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 CDC14BO60729 498 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 NDUFS7O75251 213 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 ZNF780AO75290 641 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-221ENST00000555773 FSTL3O95633 263 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 CSF3P09919 207 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 UBBP0CG47 229 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 HTR2CP28335 458 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 SERPINB10P48595 397 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 POU3F4P49335 361 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 BMXP51813 675 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 CAPZA1P52907 286 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 DSCR9P59020 149 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 MXD1Q05195 221 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 GPR176Q14439 515 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 FAM166AQ6J272 317 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 ZNF826PQ6ZT77 177 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 RNF144BQ7Z419 303 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 Q8IYB0 196 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 POC1AQ8NBT0 407 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 RFT1Q96AA3 541 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 CHODLQ9H9P2 273 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 PLGRKTQ9HBL7 147 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 RSL24D1Q9UHA3 163 aaKnown RBP10.51□□□□□ -0.73
SHMT2-221ENST00000555773 ING4Q9UNL4 249 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 POLQO75417 2590 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 APCP25054 2843 aa10.51□□□□□ -0.73
SHMT2-221ENST00000555773 A6NHS1 94 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 H3BMQ9 156 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 AIPO00170 330 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 SPRY1O43609 319 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-221ENST00000555773 SYNGR1O43759 233 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 RP2O75695 350 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 RHBDL1O75783 438 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 KDM4BO94953 1096 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 CLEC2LP0C7M8 214 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 PGA5P0DJD9 388 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 TGFBR1P36897 503 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 OR3A4PP47883 348 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 PDLIM4P50479 330 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 ERVK11-1P61568 191 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 RAB11BQ15907 218 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 GLIPR1L1Q6UWM5 242 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 PEG10Q86TG7 708 aaKnown RBP10.5□□□□□ -0.73
SHMT2-221ENST00000555773 CDH24Q86UP0 819 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 FAM90A1Q86YD7 464 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 Q8NFD4 153 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 OR5D18Q8NGL1 313 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 TBC1D15Q8TC07 691 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 LRRC29Q8WV35 223 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 YIPF5Q969M3 257 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 SLC25A28Q96A46 364 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 SLC25A46Q96AG3 418 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 C12orf43Q96C57 262 aaKnown RBP10.5□□□□□ -0.73
SHMT2-221ENST00000555773 PERPQ96FX8 193 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 CEP19Q96LK0 163 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 NRIP2Q9BQI9 281 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 MRI1Q9BV20 369 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 FAM192AQ9GZU8 254 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 DCSTAMPQ9H295 470 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 MTCH1Q9NZJ7 389 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 STEAP1Q9UHE8 339 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
SHMT2-221ENST00000555773 ARID1AO14497 2285 aa10.5□□□□□ -0.73
SHMT2-221ENST00000555773 IGKV1-12A0A0C4DH73 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms