RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 ALDOBP05062 364 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 CD2P06729 351 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 IRF2P14316 349 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
SHMT2-218ENST00000555213 SLC25A16P16260 332 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 CLDN12P56749 244 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 DMRTC1Q5HYR2 192 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 CLVS2Q5SYC1 327 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 HES5Q5TA89 166 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 PLCXD3Q63HM9 321 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 SPNS3Q6ZMD2 512 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 UTS2BQ765I0 119 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 WFDC11Q8NEX6 87 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 OR5D14Q8NGL3 314 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 C10orf105Q8TEF2 133 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 ZFAND2BQ8WV99 257 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 ITLN1Q8WWA0 313 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 ACOT12Q8WYK0 555 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 PP6455Q8WZ26 134 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 PIGCQ92535 297 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 CCL17Q92583 94 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 DVL3Q92997 716 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-218ENST00000555213 ERGIC1Q969X5 290 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 KCTD12Q96CX2 325 aaKnown RBP9.23□□□□□ -0.93
SHMT2-218ENST00000555213 TECTBQ96PL2 329 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 FGF23Q9GZV9 251 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-218ENST00000555213 FN3KRPQ9HA64 309 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 ABRACLQ9P1F3 81 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 COMMD3Q9UBI1 195 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 OR5V1Q9UGF6 321 aa9.23□□□□□ -0.93
SHMT2-218ENST00000555213 MEGF11A6BM72 1044 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 OR5B21A6NL26 309 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 A6NLC8 198 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 TMEM210A6NLX4 147 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 H0YL77 283 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 SLC17A2O00624 439 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 LDLRAD4O15165 306 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 TMEM127O75204 238 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 NRASP01111 189 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 OCMP0CE72 109 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-218ENST00000555213 ELK1P19419 428 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 BDKRB2P30411 391 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 GATA4P43694 442 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 GPR6P46095 362 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-218ENST00000555213 PSMD7P51665 324 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 TMEM33P57088 247 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 IFITM3Q01628 133 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 CNN3Q15417 329 aaKnown RBP9.22□□□□□ -0.93
SHMT2-218ENST00000555213 C2orf76Q3KRA6 126 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 TGIF2LYQ8IUE0 185 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 KRTAP1-3Q8IUG1 177 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 C1orf87Q8N0U7 546 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 OR13C9Q8NGT0 318 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 OR5P3Q8WZ94 311 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 ITPKCQ96DU7 683 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 C1orf147Q96MC9 270 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-218ENST00000555213 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 SLITRK2Q9H156 845 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 SPATA2Q9UM82 520 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 SLC7A11Q9UPY5 501 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 V9GYH0 126 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 PDZD2O15018 2839 aa9.22□□□□□ -0.93
SHMT2-218ENST00000555213 LRBAP50851 2863 aa9.21□□□□□ -0.93
SHMT2-218ENST00000555213 IGKV1-27A0A075B6S5 117 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 hCG_1807616A0A1W2PRN6 198 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 J3QRK9 145 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 PPIHO43447 177 aaKnown RBP9.21□□□□□ -0.94
SHMT2-218ENST00000555213 SULT1B1O43704 296 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 RP2O75695 350 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 EIF4EP06730 217 aaKnown RBP9.21□□□□□ -0.94
SHMT2-218ENST00000555213 CALCBP10092 127 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 RAB3AP20336 220 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 GIFP27352 417 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 GNG3P63215 75 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 QRFPP83859 136 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 CEACAM21Q3KPI0 293 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 PRAMEF6Q5VXH4 476 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 DNM1P46Q6ZS02 220 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 MOB3CQ70IA8 216 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 MOGAT3Q86VF5 341 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 CDH26Q8IXH8 852 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 OR4D6Q8NGJ1 314 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 TRMT10AQ8TBZ6 339 aaKnown RBP9.21□□□□□ -0.94
SHMT2-218ENST00000555213 AP3S1Q92572 193 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 RAB1CQ92928 201 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 YIPF5Q969M3 257 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 SLC25A38Q96DW6 304 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 RNF170Q96K19 258 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 CNTD2Q9H8S5 307 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 GCM1Q9NP62 436 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM138Q9NPI0 162 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 GPR173Q9NS66 373 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM106BQ9NUM4 274 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 STEAP1Q9UHE8 339 aa9.21□□□□□ -0.94
SHMT2-218ENST00000555213 PRRC2AP48634 2157 aaKnown RBP9.2□□□□□ -0.94
SHMT2-218ENST00000555213 IGHV4-30-2A0A087WSY4 118 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 IGHV3-64DA0A0J9YX35 117 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 ISPDA4D126 451 aa9.2□□□□□ -0.94
SHMT2-218ENST00000555213 LRP5LA4QPB2 252 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms