RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CDC42EP3Q9UKI2 254 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 HHLA2Q9UM44 414 aa10.27□□□□□ -0.77
SYNE2-214ENST00000554928 POLR3KQ9Y2Y1 108 aaPredicted RBP10.27□□□□□ -0.77
SYNE2-214ENST00000554928 RRP15Q9Y3B9 282 aaKnown RBP10.27□□□□□ -0.77
SYNE2-214ENST00000554928 TRBV2A0A0J9YWF9 115 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 IRGMA1A4Y4 181 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 OGG1O15527 345 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF12P17014 697 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 ATF1P18846 271 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 MYL12AP19105 171 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 SOX2P48431 317 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 CEBPDP49716 269 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-214ENST00000554928 GNB2P62879 340 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 DCAF12L2Q5VW00 463 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 STX19Q8N4C7 294 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 OR13C9Q8NGT0 318 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 OR52N1Q8NH53 320 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 OR5AK2Q8NH90 309 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 ANGPTL6Q8NI99 470 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 RFT1Q96AA3 541 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 GAFA1Q96PS6 74 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 NKX3-1Q99801 234 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-214ENST00000554928 BABAM2Q9NXR7 383 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 LRCH1Q9Y2L9 728 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 INSIG2Q9Y5U4 225 aa10.26□□□□□ -0.77
SYNE2-214ENST00000554928 IGKV1D-17A0A075B6S4 117 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 A0A0G2JMP0 313 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 A0A0X1KG70 313 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 PNMA8CA0A1B0GUJ8 204 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 TMEM212A6NML5 194 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 PTGES3LE9PB15 166 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 DVL1O14640 695 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 TMPRSS2O15393 492 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 CDK1P06493 297 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 CCDC159P0C7I6 412 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 FAM157CP0CG43 387 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 PGA5P0DJD9 388 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 PSG2P11465 335 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 MUC1P15941 1255 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF20P17024 532 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 SRD5A1P18405 259 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 GLRA1P23415 457 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 MPZP25189 248 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
SYNE2-214ENST00000554928 DGUOKQ16854 277 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 MICBQ29980 383 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 DMKNQ6E0U4 476 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-214ENST00000554928 RPL22L1Q6P5R6 122 aaKnown RBP10.25□□□□□ -0.77
SYNE2-214ENST00000554928 TMPRSS11AQ6ZMR5 421 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF573Q86YE8 665 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 POC1AQ8NBT0 407 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 CCDC54Q8NEL0 328 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 OR4M2Q8NGB6 313 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 PGLYRP3Q96LB9 341 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 CNBD2Q96M20 576 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 TECTBQ96PL2 329 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 NRIP2Q9BQI9 281 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 C7orf69Q9H7B7 122 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 ELL3Q9HB65 397 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-214ENST00000554928 MTCH1Q9NZJ7 389 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 NLKQ9UBE8 527 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 IL36RNQ9UBH0 155 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 DNAJB11Q9UBS4 358 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 CLN8Q9UBY8 286 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF222Q9UK12 451 aa10.25□□□□□ -0.77
SYNE2-214ENST00000554928 IGHV2-70DA0A0C4DH43 119 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 OR2AT4A6NND4 320 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 SPRY1O43609 319 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 GATBO75879 557 aaKnown RBP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 FSHBP01225 129 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 MT-ND2P03891 347 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 CALCBP10092 127 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 VHLP40337 213 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 FUT6P51993 359 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 ERVK11-1P61568 191 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 RPS11P62280 158 aaKnown RBP eCLIP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 SLC35A2P78381 396 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 PAX8Q06710 450 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 MRPL28Q13084 256 aaKnown RBP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 IKZF1Q13422 519 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 IRF3Q14653 427 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 KLF17Q5JT82 389 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 ACP7Q6ZNF0 438 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF788Q6ZQV5 615 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 UTS2BQ765I0 119 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 NLRC3Q7RTR2 1065 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 EGFL6Q8IUX8 553 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 CD177Q8N6Q3 437 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 NANOGP1Q8N7R0 232 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 OR51A2Q8NGJ7 313 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 ZNF671Q8TAW3 534 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 TSEN15Q8WW01 171 aaKnown RBP10.24□□□□□ -0.77
SYNE2-214ENST00000554928 RAB40AQ8WXH6 277 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 PP6455Q8WZ26 134 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 SLAMF9Q96A28 289 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 TMIGD2Q96BF3 282 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 C10orf35Q96D05 121 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 BORCS8Q96FH0 119 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 OR5M11Q96RB7 305 aa10.24□□□□□ -0.77
SYNE2-214ENST00000554928 COMMD4Q9H0A8 199 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms