RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 BLMP54132 1417 aaPredicted RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 NUP160Q12769 1436 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 VCANP13611 3396 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SHANK2Q9UPX8 1470 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 KCNE1BA0A087WTH5 132 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 A0A1B0GW15 77 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 METTL15A6NJ78 407 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 RFPL4AA6NLU0 287 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ZNF850A8MQ14 1090 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ANKRD65E5RJM6 399 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 RFPL4AL1F8VTS6 287 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TEX46H3BTG2 121 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 M0QZK8 103 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CCL21O00585 134 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TXNDC9O14530 226 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ARPC5O15511 151 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GMDSO60547 372 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ZMPSTE24O75844 475 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 YIF1AO95070 293 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LYPLA2O95372 231 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CST4P01036 141 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 BCHEP06276 602 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 FBP1P09467 338 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 C1GALT1C1LP0DN25 315 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SLC2A1P11166 492 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GFAPP14136 432 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GSTM3P21266 225 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 DCKP27707 260 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 HLA-DMAP28067 261 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 RCVRNP35243 200 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CEACAM6P40199 344 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 MAGEA2P43356 314 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GABRA4P48169 554 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CX3CR1P49238 355 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 MRPL19P49406 292 aaKnown RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 RAB13P51153 203 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 RGS8P57771 180 aaPredicted RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 NAA20P61599 178 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LSM6P62312 80 aaKnown RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 CCL7P80098 99 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ZNF92Q03936 586 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TNFRSF9Q07011 255 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 BAMBIQ13145 260 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TRAM2Q15035 370 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ZNF77Q15935 545 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GUK1Q16774 197 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CTSL3PQ5NE16 218 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 HACD4Q5VWC8 232 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SYPL2Q5VXT5 272 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 REEP3Q6NUK4 255 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LRRN1Q6UXK5 716 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SMIM15Q7Z3B0 74 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LYG2Q86SG7 212 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LUZP2Q86TE4 346 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SETD3Q86TU7 594 aaPredicted RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 LRP11Q86VZ4 500 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 RIMKLAQ8IXN7 391 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 HS3ST5Q8IZT8 346 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 PUSL1Q8N0Z8 303 aaKnown RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 OSR2Q8N2R0 312 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LRRC18Q8N456 261 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 C2orf73Q8N5S3 287 aaPredicted RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 FBXL13Q8NEE6 735 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 OR5B17Q8NGF7 314 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 OR4D6Q8NGJ1 314 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 OR51L1Q8NGJ5 315 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CXorf40AQ8TE69 158 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GTF2H4Q92759 462 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 HGDQ93099 445 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 BORCS5Q969J3 196 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TMEM54Q969K7 222 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TM4SF18Q96CE8 201 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 HAUS1Q96CS2 278 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CMTM5Q96DZ9 223 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 HSFY1Q96LI6 401 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 GLT1D1Q96MS3 346 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 ZNF681Q96N22 645 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 PPP1R2P1Q96PQ5 205 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CNN2Q99439 309 aaKnown RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 P2RX4Q99571 388 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 CENPKQ9BS16 269 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 COPS4Q9BT78 406 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 MED10Q9BTT4 135 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 TM6SF2Q9BZW4 377 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 UCK2Q9BZX2 261 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SRRQ9GZT4 340 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 PCBD2Q9H0N5 130 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 PPA2Q9H2U2 334 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 SGK2Q9HBY8 427 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 RGS18Q9NS28 235 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 MRM2Q9UI43 246 aaKnown RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 ZNF639Q9UID6 485 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 FBXL3Q9UKT7 428 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 PRELID3BQ9Y3B1 194 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 URGCP-MRPS24S4R325 110 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 XIRP1Q702N8 1843 aaKnown RBP1.58□□□□□ -2.16
VRK1-202ENST00000553683 NWD1Q149M9 1564 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 NEURL4Q96JN8 1562 aa1.58□□□□□ -2.16
VRK1-202ENST00000553683 LAMA2P24043 3122 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms