RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 MIOXQ9UGB7 285 aa11.61□□□□□ -0.55
TUBB3-202ENST00000553656 IGHV3OR15-7A0A075B7D8 119 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 A0A1W2PPK0 400 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 CEACAM18A8MTB9 384 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 B4DSR2 109 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 NDUFA2O43678 99 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 SYNGR1O43759 233 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 IGHV2-5P01817 119 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 IGHV4-31P0DP07 118 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 CPT2P23786 658 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 MPZP25189 248 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 BDKRB2P30411 391 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 IL2RGP31785 369 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 IL24Q13007 206 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 SMIM21Q3B7S5 101 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 ACSM3Q53FZ2 586 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 ARMCX4Q5H9R4 360 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 UBE2UQ5VVX9 321 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 SLC25A26Q70HW3 274 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 SATL1Q86VE3 508 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 CALHM1Q8IU99 346 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 PHC2Q8IXK0 858 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 MKXQ8IYA7 352 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 POC1AQ8NBT0 407 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 OR8B3Q8NGG8 313 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 TMEM203Q969S6 136 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 C12orf43Q96C57 262 aaKnown RBP11.6□□□□□ -0.55
TUBB3-202ENST00000553656 DERL3Q96Q80 235 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 OR8B2Q96RD0 313 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 GPER1Q99527 375 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 PATZ1Q9HBE1 687 aaKnown RBP11.6□□□□□ -0.55
TUBB3-202ENST00000553656 RASL12Q9NYN1 266 aa11.6□□□□□ -0.55
TUBB3-202ENST00000553656 FLNAP21333 2647 aaKnown RBP11.6□□□□□ -0.55
TUBB3-202ENST00000553656 CR1P17927 2039 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 IGKV1-27A0A075B6S5 117 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 A0A087WXM4 84 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 TRBV5-7A0A0A0MS05 114 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 NKX6-3A6NJ46 265 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 ADAM20O43506 726 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 NXPH2O95156 264 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 GYPAP02724 150 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 FSTP19883 344 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 GABRA5P31644 462 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 TGFBR2P37173 567 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 LMO4P61968 165 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 HOXA4Q00056 320 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-202ENST00000553656 KISS1Q15726 138 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 ESCO2Q56NI9 601 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 DDI2Q5TDH0 399 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 FIP1L1Q6UN15 594 aaKnown RBP11.59□□□□□ -0.55
TUBB3-202ENST00000553656 CEACAM19Q7Z692 300 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 PNLDC1Q8NA58 520 aaKnown RBP11.59□□□□□ -0.55
TUBB3-202ENST00000553656 TSPAN14Q8NG11 270 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 OR51A2Q8NGJ7 313 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 OR51F2Q8NH61 342 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 SLAMF9Q96A28 289 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 RFT1Q96AA3 541 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 NEIL1Q96FI4 390 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-202ENST00000553656 CEP19Q96LK0 163 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 SPACA5Q96QH8 159 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 SLITRK2Q9H156 845 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 TCF7L1Q9HCS4 588 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 NOX4Q9NPH5 578 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 NLKQ9UBE8 527 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 FOXJ3Q9UPW0 622 aa11.59□□□□□ -0.55
TUBB3-202ENST00000553656 TRAPPC2LH3BP13 241 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 CD5LO43866 347 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 NOS1APO75052 506 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-202ENST00000553656 FOXH1O75593 365 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 RGS9O75916 674 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-202ENST00000553656 LY6G6DO95868 133 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 ALDOBP05062 364 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 TMEM225BP0DP42 221 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 ZNF16P17020 682 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-202ENST00000553656 PCMT1P22061 227 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 RPS25P62851 125 aaKnown RBP11.58□□□□□ -0.56
TUBB3-202ENST00000553656 GNB2P62879 340 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 PDZK1IP1Q13113 114 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 NEDD8Q15843 81 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 SLC36A1Q7Z2H8 476 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 Q8IYB0 196 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 OR5D18Q8NGL1 313 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 MSI2Q96DH6 328 aaKnown RBP11.58□□□□□ -0.56
TUBB3-202ENST00000553656 ZNF488Q96MN9 340 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 SMR3AQ99954 134 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 NRIP2Q9BQI9 281 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 FAM192AQ9GZU8 254 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 WDR13Q9H1Z4 485 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 LPAR2Q9HBW0 351 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 SMURF1Q9HCE7 757 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 SNTG1Q9NSN8 517 aa11.58□□□□□ -0.56
TUBB3-202ENST00000553656 MAP1AP78559 2803 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-202ENST00000553656 F8P00451 2351 aa11.57□□□□□ -0.56
TUBB3-202ENST00000553656 MEGF11A6BM72 1044 aa11.57□□□□□ -0.56
TUBB3-202ENST00000553656 OR2AT4A6NND4 320 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms