RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 LDLRAD3Q86YD5 345 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 PNKDQ8N490 385 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 OR2T27Q8NH04 317 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 GATAD2BQ8WXI9 593 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 SDSLQ96GA7 329 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 DMRTB1Q96MA1 342 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 RBM4BQ9BQ04 359 aaKnown RBP10.68□□□□□ -0.7
NPAS3-209ENST00000551008 NRIP2Q9BQI9 281 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 UNKLQ9H9P5 680 aaKnown RBP10.68□□□□□ -0.7
NPAS3-209ENST00000551008 HES4Q9HCC6 221 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 NOX4Q9NPH5 578 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 TNFRSF19Q9NS68 423 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 ONECUT1Q9UBC0 465 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 SLC25A10Q9UBX3 287 aaPredicted RBP10.68□□□□□ -0.7
NPAS3-209ENST00000551008 SNX5Q9Y5X3 404 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 VWFP04275 2813 aa10.68□□□□□ -0.7
NPAS3-209ENST00000551008 A0A1B0GVI7 797 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 FAM181BA6NEQ2 426 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 NKX6-3A6NJ46 265 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 METTL15A6NJ78 407 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 DHRS7CA6NNS2 312 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 F8VVB4 439 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 F8VWA3 439 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 DLGAP1O14490 977 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 GPR37O15354 613 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 ENTPD6O75354 484 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 IGHV4-59P01825 116 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 GABRB1P18505 474 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 HAAOP46952 286 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 UBE2V2Q15819 145 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 ODF4Q2M2E3 257 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 ZIK1Q3SY52 487 aaPredicted RBP10.67□□□□□ -0.7
NPAS3-209ENST00000551008 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 ANGPTL5Q86XS5 388 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 BATF2Q8N1L9 274 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 C11orf42Q8N5U0 333 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 TMEM86BQ8N661 226 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 YIPF7Q8N8F6 280 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 OR10H4Q8NGA5 316 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
NPAS3-209ENST00000551008 TMIGD2Q96BF3 282 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 AJUBAQ96IF1 538 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 HIST1H2AAQ96QV6 131 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 C1RLQ9NZP8 487 aa10.67□□□□□ -0.7
NPAS3-209ENST00000551008 MEGF8Q7Z7M0 2845 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 RFPL4AA6NLU0 287 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 RFPL4AL1F8VTS6 287 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 SULT1C4O75897 302 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 KRT8P05787 483 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 GABRA2P47869 451 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 NANOS3P60323 173 aaKnown RBP10.66□□□□□ -0.7
NPAS3-209ENST00000551008 TMED1Q13445 227 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 SLC25A30Q5SVS4 291 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 FIP1L1Q6UN15 594 aaKnown RBP10.66□□□□□ -0.7
NPAS3-209ENST00000551008 CBR4Q8N4T8 237 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 MED30Q96HR3 178 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 SLC29A1Q99808 456 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 ZNF649Q9BS31 505 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 C19orf12Q9NSK7 152 aa10.66□□□□□ -0.7
NPAS3-209ENST00000551008 LOC107986453A0A1B0GWG9 222 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 A0A1W2PRD5 423 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 A0A1W2PRF3 423 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 A0A1W2PRM7 423 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 MEGF11A6BM72 1044 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 ANKRD61A6NGH8 418 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 M0R1W7 72 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 NDUFB7P17568 137 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 IER3P46695 156 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 ALDH3A2P51648 485 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 KRTAP10-3P60369 221 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 SNRPGP62308 76 aaKnown RBP10.65□□□□□ -0.7
NPAS3-209ENST00000551008 SRSF4Q08170 494 aaKnown RBP10.65□□□□□ -0.7
NPAS3-209ENST00000551008 TAF9Q16594 264 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 OCLNQ16625 522 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 KIAA2026Q5HYC2 2103 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 ZFP1Q6P2D0 407 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 CRIP3Q6Q6R5 217 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 RNF144BQ7Z419 303 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 RDH10Q8IZV5 341 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 TMEM185AQ8NFB2 350 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 OR2G2Q8NGZ5 317 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 OR10AC1Q8NH08 325 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 ZNF671Q8TAW3 534 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 TRMT10AQ8TBZ6 339 aaKnown RBP10.65□□□□□ -0.7
NPAS3-209ENST00000551008 NPRL2Q8WTW4 380 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 C17orf50Q8WW18 174 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 ADAT3Q96EY9 351 aaPredicted RBP10.65□□□□□ -0.7
NPAS3-209ENST00000551008 CHST5Q9GZS9 411 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 RASL12Q9NYN1 266 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 ZNRD1Q9P1U0 126 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 MMP24Q9Y5R2 645 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 POMT1Q9Y6A1 747 aa10.65□□□□□ -0.7
NPAS3-209ENST00000551008 IGKV1-9A0A0C4DH69 117 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 NPFFO15130 113 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 GPR137BO60478 399 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 NDUFA7O95182 113 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 SAA4P35542 130 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 OR12D2P58182 307 aa10.64□□□□□ -0.71
NPAS3-209ENST00000551008 ERVFRD-1P60508 538 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms