RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SAMHD1Q9Y3Z3 626 aaKnown RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 DMBT1Q9UGM3 2413 aaPredicted RBP3.85□□□□□ -1.79
CPSF6-206ENST00000550987 DENND4CQ5VZ89 1909 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 GOLGA8JA6NMD2 632 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 SERPINE3A8MV23 424 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 PIRO00625 290 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 SLC16A4O15374 487 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 SCN2BO60939 215 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 DEXIO95424 95 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 SERPINA5P05154 406 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 IL6P05231 212 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 MLNP12872 115 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 ICAM2P13598 275 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 NQO2P16083 231 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 DCKP27707 260 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 PSMB6P28072 239 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 IL12BP29460 328 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 SLC1A2P43004 574 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 NPBWR2P48146 333 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 RPL10AP62906 217 aaKnown RBP3.84□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF763Q0D2J5 394 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 CDH17Q12864 832 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 PIGHQ14442 188 aaPredicted RBP3.84□□□□□ -1.79
CPSF6-206ENST00000550987 PSG3Q16557 428 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 MOGQ16653 247 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 CLVS2Q5SYC1 327 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 RNF165Q6ZSG1 346 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 PEX26Q7Z412 305 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 CMC1Q7Z7K0 106 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 TMEM25Q86YD3 366 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 NELFCDQ8IXH7 590 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 CEND1Q8N111 149 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 TTC29Q8NA56 475 aaPredicted RBP3.84□□□□□ -1.79
CPSF6-206ENST00000550987 TMEM104Q8NE00 496 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 TTLQ8NG68 377 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 LYPD6BQ8NI32 183 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 RPUSD4Q96CM3 377 aaKnown RBP3.84□□□□□ -1.79
CPSF6-206ENST00000550987 OTUB2Q96DC9 234 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 CERS2Q96G23 380 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 FCRL1Q96LA6 429 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 GABRG3Q99928 467 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 OR51J1Q9H342 316 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 DEC1Q9P2X7 70 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 GNPTGQ9UJJ9 305 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 GGA2Q9UJY4 613 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 ING4Q9UNL4 249 aa3.84□□□□□ -1.79
CPSF6-206ENST00000550987 CITO14578 2027 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ABCA1O95477 2261 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 IGKV3D-20A0A0C4DH25 116 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 USP27XA6NNY8 438 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 SLC9A3R1O14745 358 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 SUPT7LO94864 414 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 SERPINA6P08185 405 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 PNMA6AP0CW24 399 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 PRB4P10163 310 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 IDO1P14902 403 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF250P15622 560 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 TUBG1P23258 451 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 CFL1P23528 166 aaKnown RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 RGRP47804 291 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 SLC7A9P82251 487 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 MRPS25P82663 173 aaKnown RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 GLO1Q04760 184 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 CLINT1Q14677 625 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 C18orf21Q32NC0 220 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ZBED5Q49AG3 693 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF470Q6ECI4 717 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 LCN12Q6JVE5 192 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 H3F3CQ6NXT2 135 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 Q6ZSR3 168 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 FAM122BQ7Z309 247 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 DAW1Q8N136 415 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 HSD17B11Q8NBQ5 300 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 C7orf33Q8WU49 177 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ANKRD9Q96BM1 317 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 RMND5BQ96G75 393 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ZNF514Q96K75 400 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 XPO6Q96QU8 1125 aaKnown RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 OR5B12Q96R08 314 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 PYGO2Q9BRQ0 406 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 MED10Q9BTT4 135 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 ASB8Q9H765 288 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 DYRK4Q9NR20 520 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 TUBG2Q9NRH3 451 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 AHSPQ9NZD4 102 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 TMEM9Q9P0T7 183 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 NAGKQ9UJ70 344 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 SCN1AP35498 2009 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 MYO7BQ6PIF6 2116 aa3.83□□□□□ -1.8
CPSF6-206ENST00000550987 HRNRQ86YZ3 2850 aaPredicted RBP3.83□□□□□ -1.8
CPSF6-206ENST00000550987 PLXNB1O43157 2135 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 HCFC1P51610 2035 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 GLYATL1P3A0A0U1RQE8 302 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 KBTBD11-OT1A0A1B0GTJ5 212 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 E7ENQ6 273 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 F6UB75 175 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 M0R3G1 203 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 GPR171O14626 319 aa3.82□□□□□ -1.8
CPSF6-206ENST00000550987 TOR1AO14656 332 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms