RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KHDRBS3O75525 346 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 DCTN3O75935 186 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 TFF1P04155 84 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 HIST1H2ABP04908 130 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 SPI1P17947 270 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 CALB2P22676 271 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 ACKR3P25106 362 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 SLC6A6P31641 620 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 SLC25A1P53007 311 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 DVL1P1P54792 670 aaPredicted RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 RPS23P62266 143 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 HSF2Q03933 536 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 ZNF92Q03936 586 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 TRAP1Q12931 704 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 BNIP1Q12981 228 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 GK2Q14410 553 aaPredicted RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 MPPED2Q15777 294 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 TSTQ16762 297 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 C2orf68Q2NKX9 166 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 SLC36A3Q495N2 470 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 GLYATL3Q5SZD4 288 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 CYB5R2Q6BCY4 276 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 OR2T5Q6IEZ7 315 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 OR2T2Q6IF00 324 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 HIST3H2AQ7L7L0 130 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 KRT74Q7RTS7 529 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 TRPM8Q7Z2W7 1104 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 HDDC2Q7Z4H3 204 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 CPLX4Q7Z7G2 160 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 ODF3L1Q8IXM7 274 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 CCDC197Q8NCU1 140 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 OR2T29Q8NH02 315 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 OR2AE1Q8NHA4 323 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 ZNF420Q8TAQ5 688 aaPredicted RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 HPSE2Q8WWQ2 592 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 RDH5Q92781 318 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 TAF15Q92804 592 aaKnown RBP eCLIP4□□□□□ -1.77
SCAF11-214ENST00000550893 HIST1H2ACQ93077 130 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 HAVCR1Q96D42 359 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 CMBLQ96DG6 245 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 FEVQ99581 238 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 BCL2L14Q9BZR8 327 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 NSRP1Q9H0G5 558 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 RAB1BQ9H0U4 201 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 MMP28Q9H239 520 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 ZNF665Q9H7R5 613 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 LPAR2Q9HBW0 351 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 DYNLRB1Q9NP97 96 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 CMC2Q9NRP2 79 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 PTTG3PQ9NZH4 202 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 STX18Q9P2W9 335 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 SLC25A10Q9UBX3 287 aaPredicted RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 PRPF19Q9UMS4 504 aaKnown RBP4□□□□□ -1.77
SCAF11-214ENST00000550893 COPS3Q9UNS2 423 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 AURKCQ9UQB9 309 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 POMPQ9Y244 141 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 TIMM10BQ9Y5J6 103 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 COL7A1Q02388 2944 aa4□□□□□ -1.77
SCAF11-214ENST00000550893 LOC105371242A0A075B767 164 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 hCG_38984A0A1B0GV85 526 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 A0A1W2PPW3 197 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 DHRS12A0PJE2 317 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 CEACAM18A8MTB9 384 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 C12orf71A8MTZ7 269 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 F5H5P2 479 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 TNFRSF11BO00300 401 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 NDUFAB1O14561 156 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 SURF4O15260 269 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 PLPP2O43688 288 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 OR10H3O60404 316 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 SELENOFO60613 162 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 FKBP6O75344 327 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 FARS2O95363 451 aaKnown RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 TGFAP01135 160 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 HLA-DPB1P04440 258 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 MSMBP08118 114 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 SLC2A1P11166 492 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 ITGA2P17301 1181 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 ADRA2CP18825 462 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 PRKACGP22612 351 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 CCNOP22674 350 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 APLNRP35414 380 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 RPL4P36578 427 aaKnown RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 OPRL1P41146 370 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 GPR6P46095 362 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 GDI2P50395 445 aaKnown RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 DAPP51397 102 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 CDK5Q00535 292 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 RELQ04864 619 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 MFGE8Q08431 387 aaPredicted RBP3.99□□□□□ -1.77
SCAF11-214ENST00000550893 SCRN3Q0VDG4 424 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 CARTPTQ16568 116 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 CTF1Q16619 201 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 MICAQ29983 383 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 CHRFAM7AQ494W8 412 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 TEX30Q5JUR7 227 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 PRAMEF6Q5VXH4 476 aa3.99□□□□□ -1.77
SCAF11-214ENST00000550893 TMEM236Q5W0B7 351 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms