RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TAAR3PQ9P1P4 343 aa14.79□□□□□ -0.04
HDAC7-227ENST00000548080 EXTL2Q9UBQ6 330 aa14.79□□□□□ -0.04
HDAC7-227ENST00000548080 ANKRD30BLA7E2S9 258 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 ARSBP15848 533 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 PTBP1P26599 531 aaKnown RBP eCLIP14.78□□□□□ -0.042e-7■■■■□ 20.7
HDAC7-227ENST00000548080 FUT6P51993 359 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 KLF3P57682 345 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-227ENST00000548080 PRDX4Q13162 271 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 PLCXD3Q63HM9 321 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 ANGPTL5Q86XS5 388 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 CMTM4Q8IZR5 234 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 PNLDC1Q8NA58 520 aaKnown RBP14.78□□□□□ -0.04
HDAC7-227ENST00000548080 OR4M1Q8NGD0 313 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 KLF14Q8TD94 323 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-227ENST00000548080 RAB40AQ8WXH6 277 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 CPNE2Q96FN4 548 aaPredicted RBP14.78□□□□□ -0.04
HDAC7-227ENST00000548080 PPP1R3EQ9H7J1 279 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 GPR160Q9UJ42 338 aa14.78□□□□□ -0.04
HDAC7-227ENST00000548080 TMEM272A0A1B0GTI8 110 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 FAM230AA0A1W2PPH8 454 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 SSX4O60224 188 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 BPNT1O95861 308 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 ZNF250P15622 560 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 MTCP1P56278 107 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 NKPD1Q17RQ9 610 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 ZNF718Q3SXZ3 478 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 CRIP3Q6Q6R5 217 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 LHFPL2Q6ZUX7 228 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 ZDHHC23Q8IYP9 409 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 LRRC75A-AS1Q8N1F1 130 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 SLC25A38Q96DW6 304 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 BORCS8Q96FH0 119 aa14.77□□□□□ -0.04
HDAC7-227ENST00000548080 MRPS28Q9Y2Q9 187 aaKnown RBP14.77□□□□□ -0.04
HDAC7-227ENST00000548080 H7C417 338 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 NAT2P11245 290 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 PAX1P15863 534 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 GCH1P30793 250 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 OR3A4PP47883 348 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 RBP2P50120 134 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 ATP1B3P54709 279 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 PSG7Q13046 419 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 AWAT2Q6E213 333 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 C16orf87Q6PH81 154 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 BHLHE23Q8NDY6 225 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 S100A16Q96FQ6 103 aaKnown RBP14.76□□□□□ -0.05
HDAC7-227ENST00000548080 Q96MF0 132 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 HIST1H2AAQ96QV6 131 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 PALMDQ9NP74 551 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 RHBDL2Q9NX52 303 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 MRPL15Q9P015 296 aaKnown RBP14.76□□□□□ -0.05
HDAC7-227ENST00000548080 MPC1Q9Y5U8 109 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 CHD3Q12873 2000 aaKnown RBP14.76□□□□□ -0.05
HDAC7-227ENST00000548080 IQCF6A8MYZ5 107 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 M0R233 179 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 LDLRAD4O15165 306 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 PTGFRP43088 359 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 PLA2G7Q13093 441 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 IL18Q14116 193 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 ZNF79Q15937 498 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 MBNL2Q5VZF2 373 aaKnown RBP14.76□□□□□ -0.05
HDAC7-227ENST00000548080 GLIPR1L1Q6UWM5 242 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 PTX4Q96A99 478 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 RFT1Q96AA3 541 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 SRRQ9GZT4 340 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 KCNK15Q9H427 330 aa14.76□□□□□ -0.05
HDAC7-227ENST00000548080 ZNF469Q96JG9 3925 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-227ENST00000548080 FLNAP21333 2647 aaKnown RBP14.75□□□□□ -0.05
HDAC7-227ENST00000548080 IGLV3-9A0A075B6K5 115 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 IGKV1-27A0A075B6S5 117 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 LILRA1O75019 489 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 UBBP0CG47 229 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 RAB6AP20340 208 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 KITLGP21583 273 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 PPOXP50336 477 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 EFNB2P52799 333 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 QRFPP83859 136 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 MADCAM1Q13477 382 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 CEACAM21Q3KPI0 293 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 PYDC2Q56P42 97 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 BAIAP2L2Q6UXY1 529 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 ZNF525Q8N782 197 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 DTX3Q8N9I9 347 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 OR5A2Q8NGI9 324 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 TNFAIP8L1Q8WVP5 186 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 RABL2AQ9UBK7 228 aaPredicted RBP14.75□□□□□ -0.05
HDAC7-227ENST00000548080 GHRLQ9UBU3 117 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 FBLN5Q9UBX5 448 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 PURGQ9UJV8 347 aaKnown RBP14.75□□□□□ -0.05
HDAC7-227ENST00000548080 RAB22AQ9UL26 194 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 RABL2BQ9UNT1 228 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 HIVEP1P15822 2718 aa14.75□□□□□ -0.05
HDAC7-227ENST00000548080 PQLC2LA1A4F0 135 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 TIMM8AO60220 97 aaPredicted RBP14.74□□□□□ -0.05
HDAC7-227ENST00000548080 VSIG8P0DPA2 414 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 NR4A2P43354 598 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 PITPNBP48739 271 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 MMP15P51511 669 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 SELENOVP59797 346 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 ZP1P60852 638 aa14.74□□□□□ -0.05
HDAC7-227ENST00000548080 CARTPTQ16568 116 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms