RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ARV1Q9H2C2 271 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 DSN1Q9H410 356 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 METTL8Q9H825 291 aaKnown RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 WDR54Q9H977 334 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 UCK1Q9HA47 277 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 IMP3Q9NV31 184 aaKnown RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 USE1Q9NZ43 259 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 MTFP1Q9UDX5 166 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 PCYOX1Q9UHG3 505 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 NAGKQ9UJ70 344 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 KLK13Q9UKR3 277 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 WIF1Q9Y5W5 379 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 HEBP2Q9Y5Z4 205 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ANKRD11Q6UB99 2663 aaPredicted RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ITGB4P16144 1822 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 RLFQ13129 1914 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 AK9Q5TCS8 1911 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 A0A087WWV3 80 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TRAV8-4A0A0B4J246 113 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 IGHV2OR16-5A0A0B4J2B6 119 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 PI15O43692 258 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 PSIP1O75475 530 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TNFSF13O75888 250 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 MMP23AO75900 390 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 P01737 135 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 GNAO1P09471 354 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 HSPD1P10809 573 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 THRAP10827 490 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 FOLR2P14207 255 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 RCC1P18754 421 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 RPA3P35244 121 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 GALR1P47211 349 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TUFMP49411 452 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 RPS23P62266 143 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 PRR3P79522 188 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 SLC7A9P82251 487 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 RAB31Q13636 194 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TRAM1Q15629 374 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TRIP13Q15645 432 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 ZNHIT3Q15649 155 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TMEM249Q2WGJ8 235 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TTLL9Q3SXZ7 439 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TFDP3Q5H9I0 405 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 IDNKQ5T6J7 187 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 SDHAF4Q5VUM1 108 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 SMIM5Q71RC9 77 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 STRADAQ7RTN6 431 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 C12orf56Q8IXR9 622 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 LRRC52Q8N7C0 313 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 OR11H7Q8NGC8 314 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 RNASEH2CQ8TDP1 164 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 C17orf50Q8WW18 174 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 RGP1Q92546 391 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 CREB3L1Q96BA8 519 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 HAUS1Q96CS2 278 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 TEAD3Q99594 435 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 NRIP2Q9BQI9 281 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 YTHDF1Q9BYJ9 559 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 DEFB126Q9BYW3 111 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 SHCBP1LQ9BZQ2 653 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 SLIRPQ9GZT3 109 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 PARP12Q9H0J9 701 aaKnown RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 OR51B5Q9H339 312 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 PRORYQ9H606 182 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 EDA2RQ9HAV5 297 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 MED4Q9NPJ6 270 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 NLE1Q9NVX2 485 aaPredicted RBP3.11□□□□□ -1.91
SCAF11-210ENST00000547654 SNX24Q9Y343 169 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 NEUROG3Q9Y4Z2 214 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 ABCB11O95342 1321 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 XIRP2A4UGR9 3374 aa3.11□□□□□ -1.91
SCAF11-210ENST00000547654 COL5A3P25940 1745 aaPredicted RBP3.1□□□□□ -1.91
SCAF11-210ENST00000547654 NRXN2Q9P2S2 1712 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 IGHV3OR16-9A0A0B4J2B5 98 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 GOLGA8KD6RF30 607 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 GOLGA8MH3BSY2 632 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 FABP7O15540 132 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 ADAP1O75689 374 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 DEXIO95424 95 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 BGLAPP02818 100 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 CAPN2P17655 700 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 RAB3AP20336 220 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 GGT2P36268 569 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 HAAOP46952 286 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 CYB561P49447 251 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 MEOX2P50222 304 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 UBE2NP61088 152 aaKnown RBP3.1□□□□□ -1.91
SCAF11-210ENST00000547654 RHOAP61586 193 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 CACNG7P62955 275 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 MED21Q13503 144 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 KIAA0040Q15053 153 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 OR1Q1Q15612 314 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 GUCA2BQ16661 112 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 KHDRBS2Q5VWX1 349 aaKnown RBP3.1□□□□□ -1.91
SCAF11-210ENST00000547654 MFSD14CQ5VZR4 134 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 EPGNQ6UW88 154 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 DCXRQ7Z4W1 244 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 TMEM25Q86YD3 366 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 FAM71E2Q8N5Q1 922 aa3.1□□□□□ -1.91
SCAF11-210ENST00000547654 LFNGQ8NES3 379 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms