RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ZNF224Q9NZL3 707 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 COL12A1Q99715 3063 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 LOC390937A0A1W2PQ73 354 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 SCGB1D2O95969 90 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 HAAOP46952 286 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 CLDN18P56856 261 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 SEC61A1P61619 476 aaKnown RBP11.05□□□□□ -0.64
SCAF11-209ENST00000547018 PHLDA2Q53GA4 152 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 OR52H1Q8NGJ2 320 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 PPP1R1CQ8WVI7 109 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 CHST5Q9GZS9 411 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 SCPEP1Q9HB40 452 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 FZR1Q9UM11 496 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 SLC7A11Q9UPY5 501 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 TEX13DA0A0J9YY54 714 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-209ENST00000547018 KLRC4-KLRK1H3BQV0 150 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 SIGLEC5O15389 551 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF883P0CG24 379 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 CPT1CQ8TCG5 803 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 INTS12Q96CB8 462 aaKnown RBP11.05□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF552Q9H707 407 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-209ENST00000547018 OR2S2Q9NQN1 319 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 STARD10Q9Y365 291 aa11.05□□□□□ -0.64
SCAF11-209ENST00000547018 LOC102725191A0A1B0GVB3 256 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 OR5H14A6NHG9 310 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 DHRS7CA6NNS2 312 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 DRAM2Q6UX65 266 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 C17orf78Q8N4C9 275 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SLAMF9Q96A28 289 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 ADGRG7Q96K78 797 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 CMSS1Q9BQ75 279 aaKnown RBP11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SLC25A21Q9BQT8 299 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SF3B5Q9BWJ5 86 aaKnown RBP11.04□□□□□ -0.64
SCAF11-209ENST00000547018 PECRQ9BY49 303 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 OR14I1A6ND48 311 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 GIPP09681 153 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-209ENST00000547018 ARHGDIBP52566 201 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SCAND1P57086 179 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 OR2T2Q6IF00 324 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 TRIB1Q96RU8 372 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 METTL9Q9H1A3 318 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 PPA2Q9H2U2 334 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SNRPGP15A8MWD9 76 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 C21orf140B9A014 251 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 MCRIP1C9JLW8 97 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 LILRA1O75019 489 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 IL5P05113 134 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 TPOP07202 933 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 CHRM2P08172 466 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 RAB6AP20340 208 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 THBS4P35443 961 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SERPINF1P36955 418 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 RPS27AP62979 156 aaKnown RBP11.04□□□□□ -0.64
SCAF11-209ENST00000547018 CLN3Q13286 438 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 MEF2DQ14814 521 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 KCNMB1Q16558 191 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 TMUB2Q71RG4 321 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 LYPD6Q86Y78 171 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 HAS2Q92819 552 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 MRGPRFQ96AM1 343 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF2Q9BSG1 426 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-209ENST00000547018 SPRY4Q9C004 299 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 FN3KRPQ9HA64 309 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 UBQLN2Q9UHD9 624 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 MAB21L2Q9Y586 359 aa11.04□□□□□ -0.64
SCAF11-209ENST00000547018 ZZEF1O43149 2961 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 TRGV5A0A0B4J1U4 118 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 F8VVB4 439 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 F8VWA3 439 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 HS3ST1O14792 307 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CYTIPO60759 359 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 IFNA7P01567 189 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 APOC1P02654 83 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF250P15622 560 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CPT2P23786 658 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 FAM3AP98173 230 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 PLP2Q04941 152 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 SEZ6L2Q6UXD5 910 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CXorf67Q86X51 503 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-209ENST00000547018 TERB2Q8NHR7 220 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 KIAA1549Q9HCM3 1950 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 C9orf170A2RU37 121 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 BET1O15155 118 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CYC1P08574 325 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 CLEC9AQ6UXN8 241 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF767PQ75MW2 155 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 TMEM200AQ86VY9 491 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF611Q8N823 705 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 RDH5Q92781 318 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 PHB2Q99623 299 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 SULT4A1Q9BR01 284 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 HEXA-AS1Q9H8Q6 139 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 SH3BGRL2Q9UJC5 107 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 IGKV1-12A0A0C4DH73 117 aa11.03□□□□□ -0.64
SCAF11-209ENST00000547018 LGALS8O00214 317 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms