RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PARP16Q8N5Y8 322 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 TMEM186Q96B77 213 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 SPSB1Q96BD6 273 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 TMIGD2Q96BF3 282 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 SEH1LQ96EE3 360 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 OPALINQ96PE5 141 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 OR5M11Q96RB7 305 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 PKIBQ9C010 78 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 WDR13Q9H1Z4 485 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 SNTG1Q9NSN8 517 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 HIF1ANQ9NWT6 349 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 TLN2Q9Y4G6 2542 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 MAGEB3O15480 346 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 CYB5AP00167 134 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 HCKP08631 526 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 HSMCR30P0CW71 290 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 PCMT1P22061 227 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 PITPNBP48739 271 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 SEC61A1P61619 476 aaKnown RBP14.05□□□□□ -0.16
LTBR-215ENST00000546296 GNB2P62879 340 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 LHFPL2Q6ZUX7 228 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 CALHM1Q8IU99 346 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 POC1AQ8NBT0 407 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 OR5T2Q8NGG2 359 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 OR13C5Q8NGS8 318 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 TMEM106AQ96A25 262 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 C12orf43Q96C57 262 aaKnown RBP14.05□□□□□ -0.16
LTBR-215ENST00000546296 ZNF488Q96MN9 340 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 SSBP3Q9BWW4 388 aaPredicted RBP14.05□□□□□ -0.16
LTBR-215ENST00000546296 YTHDF1Q9BYJ9 559 aaKnown RBP14.05□□□□□ -0.16
LTBR-215ENST00000546296 RASL12Q9NYN1 266 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 CLN8Q9UBY8 286 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 LRCH1Q9Y2L9 728 aa14.05□□□□□ -0.16
LTBR-215ENST00000546296 LSM2Q9Y333 95 aaKnown RBP14.05□□□□□ -0.16
LTBR-215ENST00000546296 IGKV1-27A0A075B6S5 117 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.04□□□□□ -0.16
LTBR-215ENST00000546296 TMPRSS2O15393 492 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 PHF1O43189 567 aaPredicted RBP14.04□□□□□ -0.16
LTBR-215ENST00000546296 SULT1B1O43704 296 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 INMTO95050 263 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 NXPH2O95156 264 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 CD1AP06126 327 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 PGA5P0DJD9 388 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 RAB3AP20336 220 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 ZFP36P26651 326 aaKnown RBP14.04□□□□□ -0.16
LTBR-215ENST00000546296 MAP2K4P45985 399 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 POU3F4P49335 361 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 ACSM1Q08AH1 577 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 IL24Q13007 206 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 FAHD2BQ6P2I3 314 aaPredicted RBP14.04□□□□□ -0.16
LTBR-215ENST00000546296 SLC25A26Q70HW3 274 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 BATF2Q8N1L9 274 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 FAHD2AQ96GK7 314 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 PGLYRP3Q96LB9 341 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 CCL13Q99616 98 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 TAS2R4Q9NYW5 299 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 NLKQ9UBE8 527 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 CKLFQ9UBR5 152 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 OR5V1Q9UGF6 321 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 ABCA1O95477 2261 aa14.04□□□□□ -0.16
LTBR-215ENST00000546296 NIPBLQ6KC79 2804 aaeCLIP14.04□□□□□ -0.16
LTBR-215ENST00000546296 HIVEP2P31629 2446 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 TRBV5-5A0A0J9YX44 114 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 NKX6-3A6NJ46 265 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 TNFRSF13BO14836 293 aaPredicted RBP14.03□□□□□ -0.16
LTBR-215ENST00000546296 NOS1APO75052 506 aaPredicted RBP14.03□□□□□ -0.16
LTBR-215ENST00000546296 MPZP25189 248 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 GABRA2P47869 451 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 GABARAPL2P60520 117 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 PPP3R1P63098 170 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 DOC2BQ14184 412 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 SMIM21Q3B7S5 101 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 Q499Y3 187 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 SLC36A1Q7Z2H8 476 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 SATL1Q86VE3 508 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 MKXQ8IYA7 352 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 UFD1Q92890 307 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 SLAMF9Q96A28 289 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 RFT1Q96AA3 541 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 SPACA5Q96QH8 159 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 NRIP2Q9BQI9 281 aa14.03□□□□□ -0.16
LTBR-215ENST00000546296 A0A0G2JMP0 313 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 A0A0X1KG70 313 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 A0A1W2PPK0 400 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 OR2AT4A6NND4 320 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 ALX3O95076 343 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 ACAA1P09110 424 aaPredicted RBP14.02□□□□□ -0.17
LTBR-215ENST00000546296 HNF1AP20823 631 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 NPY4RP50391 375 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 RPS11P62280 158 aaKnown RBP eCLIP14.02□□□□□ -0.17
LTBR-215ENST00000546296 CR1LQ2VPA4 569 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 DCAF12L2Q5VW00 463 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 WDR25Q64LD2 544 aaPredicted RBP14.02□□□□□ -0.17
LTBR-215ENST00000546296 STUMQ69YW2 141 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 ACP7Q6ZNF0 438 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 MS4A15Q8N5U1 240 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 OR4M2Q8NGB6 313 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 CPNE2Q96FN4 548 aaPredicted RBP14.02□□□□□ -0.17
LTBR-215ENST00000546296 CEP19Q96LK0 163 aa14.02□□□□□ -0.17
LTBR-215ENST00000546296 OR14A2Q96R54 314 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms