RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 SEC22CQ9BRL7 303 aa13.81□□□□□ -0.2
SPDEF-202ENST00000544425 PROCRQ9UNN8 238 aa13.81□□□□□ -0.2
SPDEF-202ENST00000544425 MPC1Q9Y5U8 109 aa13.81□□□□□ -0.2
SPDEF-202ENST00000544425 NPTNQ9Y639 398 aa13.81□□□□□ -0.2
SPDEF-202ENST00000544425 RLN1P04808 185 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 VSIG10L2P0DP72 767 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 CXCL3P19876 107 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 PER3P56645 1201 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 CXADRP78310 365 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 P2RY6Q15077 328 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 VAX1Q5SQQ9 334 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 FBXW12Q6X9E4 464 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 TMEM200AQ86VY9 491 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 HOGA1Q86XE5 327 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 SLC7A5P1Q8MH63 180 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 OSR2Q8N2R0 312 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 C17orf78Q8N4C9 275 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 OR13C8Q8NGS7 320 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 OR4K15Q8NH41 348 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 CCDC107Q8WV48 283 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 DCHS1Q96JQ0 3298 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 IGKV3-15P01624 115 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 HOXD4P09016 255 aaPredicted RBP13.8□□□□□ -0.2
SPDEF-202ENST00000544425 HRH1P35367 487 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF324BQ6AW86 544 aaPredicted RBP13.8□□□□□ -0.2
SPDEF-202ENST00000544425 RFPL4BQ6ZWI9 263 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 CD163Q86VB7 1156 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 CALHM1Q8IU99 346 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 WDR31Q8NA23 367 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 HPSE2Q8WWQ2 592 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 HIST1H2AAQ96QV6 131 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 OBP2BQ9NPH6 170 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF71Q9NQZ8 489 aaPredicted RBP13.8□□□□□ -0.2
SPDEF-202ENST00000544425 PLEKHJ1Q9NW61 149 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF222Q9UK12 451 aa13.8□□□□□ -0.2
SPDEF-202ENST00000544425 LOC400499M0QZD8 3231 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 FREM1Q5H8C1 2179 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 TMEM82A0PJX8 343 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 FIGNL2A6NMB9 653 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 ANKRD30BLA7E2S9 258 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 PRSS44E7EML9 344 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 IFNA6P05013 189 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 TPOP07202 933 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 GABRR1P24046 479 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 HOXC12P31275 282 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 TIMP3P35625 211 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 MRPS15P82914 257 aaKnown RBP13.79□□□□□ -0.2
SPDEF-202ENST00000544425 SIGIRRQ6IA17 410 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 BEND4Q6ZU67 534 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 ARRDC1Q8N5I2 433 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF611Q8N823 705 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 ZDHHC22Q8N966 263 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF610Q8N9Z0 462 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 HYLS1Q96M11 299 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 RANBP3Q9H6Z4 567 aaPredicted RBP13.79□□□□□ -0.2
SPDEF-202ENST00000544425 CDH20Q9HBT6 801 aa13.79□□□□□ -0.2
SPDEF-202ENST00000544425 UBE2QL1A1L167 161 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 FAM172BPA6NC97 362 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 FABP7O15540 132 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 TOXO94900 526 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 PLATP00750 562 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 SFTPBP07988 381 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 PMELP40967 661 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 IDH3GP51553 393 aaPredicted RBP13.78□□□□□ -0.2
SPDEF-202ENST00000544425 CDK10Q15131 360 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 TAF9Q16594 264 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 TBR1Q16650 682 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 NKPD1Q17RQ9 610 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 SCGB2B2Q4G0G5 96 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 Q5BKY6 102 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 C1orf185Q5T7R7 199 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 ELP2Q6IA86 826 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 C6orf201Q7Z4U5 140 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 OR5P3Q8WZ94 311 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 FGF23Q9GZV9 251 aaPredicted RBP13.78□□□□□ -0.2
SPDEF-202ENST00000544425 CHST6Q9GZX3 395 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 CRIM1Q9NZV1 1036 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF69Q9UC07 566 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 FAM215AQ9Y5M1 114 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 SMPD2O60906 423 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 CELA3BP08861 270 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 TUBG1P23258 451 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 IL32P24001 234 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 MICBQ29980 383 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 ATPAF1Q5TC12 328 aaPredicted RBP13.78□□□□□ -0.2
SPDEF-202ENST00000544425 SLC25A26Q70HW3 274 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 MYPOPQ86VE0 399 aaPredicted RBP13.78□□□□□ -0.2
SPDEF-202ENST00000544425 FAM169BQ8N8A8 192 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 ZNF436Q9C0F3 470 aaPredicted RBP13.78□□□□□ -0.2
SPDEF-202ENST00000544425 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 ST3GAL6Q9Y274 331 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 BOLA1Q9Y3E2 137 aa13.78□□□□□ -0.2
SPDEF-202ENST00000544425 TNRC6AQ8NDV7 1962 aaKnown RBP13.78□□□□□ -0.2
SPDEF-202ENST00000544425 RTTNQ86VV8 2226 aa13.77□□□□□ -0.2
SPDEF-202ENST00000544425 A0A1W2PR80 420 aa13.77□□□□□ -0.21
SPDEF-202ENST00000544425 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
SPDEF-202ENST00000544425 FAM90A18PA6NE21 464 aa13.77□□□□□ -0.21
SPDEF-202ENST00000544425 FAM90A16PA6NEW6 464 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms