RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	IL15RA	Q13261	267 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	RAB32	Q13637	225 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	RSU1	Q15404	277 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	SNAI3	Q3KNW1	292 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	GALNTL5	Q7Z4T8	443 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	C6orf201	Q7Z4U5	140 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	DTX1	Q86Y01	620 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	SGPP2	Q8IWX5	399 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	GPR137C	Q8N3F9	429 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	BOLL	Q8N9W6	283 aa	Known RBP	11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	OR5T2	Q8NGG2	359 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	OR1F12	Q8NHA8	337 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	REEP6	Q96HR9	211 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	SGCZ	Q96LD1	299 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	AIFM2	Q9BRQ8	373 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF2	Q9BSG1	426 aa	Predicted RBP	11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	SLC39A1	Q9NY26	324 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	GSKIP	Q9P0R6	139 aa		11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	MCTS1	Q9ULC4	181 aa	Known RBP	11.77	□□□□□ -0.53
PPME1-208	ENST00000543525	MSGN1	A6NI15	193 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SYNGR3	O43761	229 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525		P04436	131 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SFTPB	P07988	381 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	CCL4	P13236	92 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SRD5A2	P31213	254 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	PTGER4	P35408	488 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	S100A10	P60903	97 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	EIF5AL1	Q6IS14	154 aa	Known RBP	11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	CPT1C	Q8TCG5	803 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	TMED6	Q8WW62	240 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	TSNAX	Q99598	290 aa	Known RBP	11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SLC5A7	Q9GZV3	580 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	MMP26	Q9NRE1	261 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	HSF4	Q9ULV5	492 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	PRELID1	Q9Y255	219 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SDK1	Q7Z5N4	2213 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	CACNA1E	Q15878	2313 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	ATP6V1G2-DDX39B	F2Z307	99 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SIGLEC5	O15389	551 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	IFNA21	P01568	189 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	CARD18	P57730	90 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	ZFP36L1	Q07352	338 aa	Known RBP	11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SMCO1	Q147U7	214 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF169	Q14929	603 aa	Predicted RBP	11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	RPUSD3	Q6P087	351 aa	Known RBP	11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	IL34	Q6ZMJ4	242 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	LHFPL2	Q6ZUX7	228 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	SVBP	Q8N300	66 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF837	Q96EG3	531 aa	Predicted RBP	11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	CNTNAP3B	Q96NU0	1288 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	MICU1	Q9BPX6	476 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	TMEM38B	Q9NVV0	291 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	ANXA10	Q9UJ72	324 aa		11.76	□□□□□ -0.53
PPME1-208	ENST00000543525	IGKV1D-8	A0A087WSZ0	117 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	FAM230A	A0A1W2PPH8	454 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	LCAT	P04180	440 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	DTYMK	P23919	212 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	B3GALT5-AS1	P59052	145 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	CHAF1B	Q13112	559 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	RBM39	Q14498	530 aa	Known RBP	11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	PDSS1	Q5T2R2	415 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF774	Q6NX45	483 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	UBALD2	Q8IYN6	164 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	CLRN3	Q8NCR9	226 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	BHLHE23	Q8NDY6	225 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	OR14L1P	Q8NHC6	308 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	FNDC9	Q8TBE3	224 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	SAT2	Q96F10	170 aa	Predicted RBP	11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	CNTNAP3	Q9BZ76	1288 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	NECAP2	Q9NVZ3	263 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF391	Q9UJN7	358 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	FAM186A	A6NE01	2351 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	EML6	Q6ZMW3	1958 aa		11.75	□□□□□ -0.53
PPME1-208	ENST00000543525	RIF1	Q5UIP0	2472 aa	Known RBP	11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	CCDC187	A0A096LP49	1063 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	CRYM-AS1	A6NIL9	109 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	TSPAN9	O75954	239 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	PLAT	P00750	562 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	FAM157C	P0CG43	387 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	ACKR3	P25106	362 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	RBP2	P50120	134 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	ARHGDIB	P52566	201 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	IAH1	Q2TAA2	248 aa	Predicted RBP	11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	AAED1	Q7RTV5	226 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	YRDC	Q86U90	279 aa	Known RBP	11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	OR51F2	Q8NH61	342 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	OR2AE1	Q8NHA4	323 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	ZNF775	Q96BV0	537 aa	Predicted RBP	11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	BORCS8	Q96FH0	119 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	CMSS1	Q9BQ75	279 aa	Known RBP	11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	ACKR4	Q9NPB9	350 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	OR2S2	Q9NQN1	319 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	DECR2	Q9NUI1	292 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	AK3	Q9UIJ7	227 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	PADI1	Q9ULC6	663 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	DCHS1	Q96JQ0	3298 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	FAM74A7	A6NL05	159 aa		11.74	□□□□□ -0.53
PPME1-208	ENST00000543525	ABCD4	O14678	606 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms