RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SLC35B1P78383 322 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 MS4A2Q01362 244 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 IFITM3Q01628 133 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CAV1Q03135 178 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 EGFEM1PQ0D2K5 195 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 PMS2P3Q13401 168 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 UNC119Q13432 240 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CAPRIN1Q14444 709 aaKnown RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NDUFAF6Q330K2 333 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 YIF1BQ5BJH7 314 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 UBE2UQ5VVX9 321 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 XKRXQ6PP77 449 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 C5orf46Q6UWT4 87 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 MOB1BQ7L9L4 216 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ABHD12BQ7Z5M8 362 aaPredicted RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 HORMAD1Q86X24 394 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CBLN2Q8IUK8 224 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 OR6K6Q8NGW6 343 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 DCAKDQ8WVC6 231 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 APH1BQ8WW43 257 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 S100ZQ8WXG8 99 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 TESCQ96BS2 214 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 COL21A1Q96P44 957 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 P2RX4Q99571 388 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 C12orf57Q99622 126 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 MICU1Q9BPX6 476 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 APOL2Q9BQE5 337 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 EBF4Q9BQW3 602 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 SEC22CQ9BRL7 303 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CNPY3Q9BT09 278 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 DCUN1D5Q9BTE7 237 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 MED10Q9BTT4 135 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ULBP2Q9BZM5 246 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 C20orf27Q9GZN8 174 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 SRMSQ9H3Y6 488 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 C1orf198Q9H425 327 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NANOGQ9H9S0 305 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 HMG20AQ9NP66 347 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 IFT46Q9NQC8 304 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 AIG1Q9NVV5 245 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NECAP2Q9NVZ3 263 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 COA4Q9NYJ1 87 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 GLTPQ9NZD2 209 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF581Q9P0T4 197 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 APOBEC3BQ9UH17 382 aaKnown RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 GLS2Q9UI32 602 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 NXT1Q9UKK6 140 aaKnown RBP2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 PSMD13Q9UNM6 376 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 PROCRQ9UNN8 238 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 POMPQ9Y244 141 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 VSIG4Q9Y279 399 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ASF1AQ9Y294 204 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 MOB4Q9Y3A3 225 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 WDFY4Q6ZS81 3184 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 USP24Q9UPU5 2620 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 ROBO3Q96MS0 1386 aa2.98□□□□□ -1.93
SFSWAP-211ENST00000542813 CHD7Q9P2D1 2997 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 PTPRFP10586 1907 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 ASTN1O14525 1302 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 REV3LO60673 3130 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 A0A1B0GVI7 797 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 RNASEK-C17orf49H0YIS7 233 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 H7C423 109 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 TNFSF11O14788 317 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 ERI3O43414 337 aaKnown RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 SCN2BO60939 215 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 CRLF1O75462 422 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 SRP72O76094 671 aaKnown RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 SEMA3DO95025 777 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 LYPLA2O95372 231 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 FADS2O95864 444 aaKnown RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 DHFRP00374 187 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 C1QAP02745 245 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 FABP1P07148 127 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 GDF1P27539 372 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 SERPINB1P30740 379 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 BTCP35070 178 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 ARR3P36575 388 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 MEOX2P50222 304 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 OR2B6P58173 313 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 COPZ1P61923 177 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 FKBP1AP62942 108 aaKnown RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 GNA12Q03113 381 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 KRR1Q13601 381 aaKnown RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 TFDP2Q14188 446 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 PON2Q15165 354 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 TIMM50Q3ZCQ8 353 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 PRR30Q53SZ7 412 aaPredicted RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 SAPCD1Q5SSQ6 148 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 ELP2Q6IA86 826 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 APOBEC3HQ6NTF7 200 aaKnown RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 ZNF343Q6P1L6 599 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 C3orf33Q6P1S2 294 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 C12orf54Q6X4T0 127 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 PLEKHG7Q6ZR37 379 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 MBOAT2Q6ZWT7 520 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 HSD17B13Q7Z5P4 300 aaPredicted RBP2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 CYP4Z1Q86W10 505 aa2.97□□□□□ -1.93
SFSWAP-211ENST00000542813 THOC6Q86W42 341 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms